Pairwise Alignments

Query, 344 a.a., ABC transporter, substrate-binding protein (cluster 1, maltose/g3p/polyamine/iron) from Variovorax sp. SCN45

Subject, 343 a.a., spermidine/putrescine ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score = 85.9 bits (211), Expect = 1e-21
 Identities = 87/324 (26%), Positives = 147/324 (45%), Gaps = 30/324 (9%)

Query: 11  SGLAAALLAGAASAAQAEELVVGIFGGSFAEDSKTCHIASFEKKTGAKVALKLGSSSQFA 70
           S  A +LL+G A AA+ +ELV   +G           +  F K+TG KV      S++  
Sbjct: 11  SACALSLLSGTA-AAEDKELVFMNWGPYINSGI----LEQFTKETGIKVIYSTYESNETL 65

Query: 71  ASIRATGGKSDFDVVYIDNSLASQLKNEKLLETIDKSKLANAAEVSPRALDKDGQ----- 125
            +   T  +  +D+V       +++++E +L+ IDKSKL+N   +    LDK        
Sbjct: 66  YAKLKTHNQG-YDLVVPSTYFVAKMRDEGMLQKIDKSKLSNFKNLDSNYLDKPYDPNNDY 124

Query: 126 ---YVVFMTGATVI--VYDTKQIKTPPTSWADLAKPEYDGRLAIGDISGTSGSQFLMALN 180
              +VV +TG  V   +YD    +    SW DL KPE  G+L + D    +   F +AL 
Sbjct: 125 SIPHVVAITGLAVNTDMYDPNDFQ----SWGDLWKPELKGQLMLMD---DTREVFHIALR 177

Query: 181 RM--KGGTLAN--MDAGFAAIKPIAKSSVTLYTQADQIVSLFERQEIAAAVWYPDRAGSA 236
           ++   G +  +  +D  +A ++ +  +   L   +D   + +   E+   + +   A +A
Sbjct: 178 KLGYSGNSTDDKQIDEAYAELQKLMPN--VLVFNSDNPAAPYLSGEVGLGMLWNGSAAAA 235

Query: 237 IDKGLPLAIVYPKEGAVGILPALVIPKGAKSPALALKYIDEVLSKE-GQTCFAERKYAGP 295
             +GLP+ +V+PKEG +G +    I  GAK+   A K ID +L  E  +    +  Y   
Sbjct: 236 QKEGLPIKLVFPKEGGIGWVDNFAISSGAKNVDAAHKMIDFLLRPEIAEQISRDTGYLTG 295

Query: 296 VNTQVKLSDKAAKIVPYQQTFDNL 319
           V          A + P Q+  D +
Sbjct: 296 VKASNDKFQDVAPLFPSQEDLDRV 319