Pairwise Alignments

Query, 344 a.a., ABC transporter, substrate-binding protein (cluster 1, maltose/g3p/polyamine/iron) from Variovorax sp. SCN45

Subject, 345 a.a., spermidine/putrescine ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score = 74.7 bits (182), Expect = 3e-18
 Identities = 84/325 (25%), Positives = 149/325 (45%), Gaps = 29/325 (8%)

Query: 11  SGLAAALLAGAASAAQAEELVVGIFGGSFAEDSKTCHIASFEKKTGAKVALKLGSSSQFA 70
           S L AA L    + A+ +EL    +  +++E   +  +  F K+TG KV      S++  
Sbjct: 8   SALCAAALFTTNAMAKDQEL----YFYNWSEYIPSEVLEDFTKETGIKVIYSTYESNESM 63

Query: 71  ASIRATGGKSDFDVVYIDNSLASQLKNEKLLETIDKSKLANAAEVSPRALDKDGQ----- 125
            +   T G + +D+V       S+++ E +L+ ID SKL++  ++ P  L+K        
Sbjct: 64  YAKLKTQG-AGYDLVVPSTYFVSKMRKEGMLQEIDHSKLSHFKDLDPNYLNKPFDPGNKF 122

Query: 126 YVVFMTGATVIVYDTKQI-KTPPTSWADLAKPEYDGRLAIGDISGTSGSQFLMALNRMKG 184
            + ++ GAT I  +T  + K    +W DL   ++ G+L + D    +   F +AL+++  
Sbjct: 123 SIPYIWGATGIGINTDMLDKKSLKNWGDLWDAKWAGQLMLMD---DAREVFHIALSKL-- 177

Query: 185 GTLAN------MDAGFAAIKPIAKSSVTLYTQADQIVSLFERQEIAAAVWYPDRAGSAID 238
           G   N      + A +  +K +  +   L   +D   + +   E++  + +   A  A  
Sbjct: 178 GYSPNTTNPKEIKAAYRELKKLMPN--VLVFNSDFPANPYLAGEVSLGMLWNGSAYMARQ 235

Query: 239 KGLPLAIVYPKEGAVGILPALVIPKGAKSPALALKYIDEVLSKEGQTCFA-ERKYAGPVN 297
           +G P+ I++P++G +  + ++ IP GAK+   A K ID +L  E     A E  Y  PV 
Sbjct: 236 EGAPIQIIWPEKGTIFWMDSISIPAGAKNIEAAHKMIDFLLRPENAAKIALEIGYPTPVK 295

Query: 298 TQVKLSDKA----AKIVPYQQTFDN 318
           T   L  K       I P Q   DN
Sbjct: 296 TAHDLLPKEFANDPSIYPPQSVIDN 320