Pairwise Alignments

Query, 363 a.a., Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1) from Variovorax sp. SCN45

Subject, 377 a.a., spermidine/putrescine ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  263 bits (671), Expect = 7e-75
 Identities = 140/313 (44%), Positives = 199/313 (63%), Gaps = 2/313 (0%)

Query: 2   PALTLDRLEKRYPGHVAASSVSLSVHDGEFISLLGPSGCGKTTVLRMVAGLIEPTGGRIL 61
           P + L  + K + G     +++L V+ GEF+++LGPSGCGKTTVLRM+AG      G+IL
Sbjct: 16  PVIRLSGISKSFDGKEIIGNLNLDVNHGEFLTILGPSGCGKTTVLRMIAGFETADQGQIL 75

Query: 62  VDGRDITALPTNRRNIGLVFQSYALFPHMSVFENVAFGLRRQGMQGSELKQRVDQALASV 121
           +D +D+T +P  +R++  VFQSYALFPHM+VFENVAFGLR Q +  SE++ RV +AL  V
Sbjct: 76  LDDQDVTQVPAEQRHVNTVFQSYALFPHMTVFENVAFGLRMQKVPQSEIEPRVMEALRMV 135

Query: 122 RLSALGDRMPKQLSGGQQQRVAVARSIAPRPSILLFDEPLSNLDASLRDEMQIELKRLQR 181
           RL+ +  R P QLSGGQQQR+A+AR++  +P +LL DE LS LD  LR +MQ ELK+LQR
Sbjct: 136 RLAEMAQRKPHQLSGGQQQRIAIARAVVNKPKVLLLDESLSALDYKLRKQMQSELKQLQR 195

Query: 182 EVGITTLFVTHDQGEAMSMSDRVCVLAHGVVQQFDTPEAIYHRPATGFVASFIGRPNRLT 241
           ++GIT +FVTHDQ EA+SMSDR+ V+  G ++Q  +P  IY  P   FVA FIG  N   
Sbjct: 196 QLGITFIFVTHDQEEALSMSDRIIVMRSGKIEQDGSPREIYEDPKNLFVARFIGEINVFQ 255

Query: 242 GRVV-RANGASAAVQLDDGPMLPASAAEGMVQGAAVDVVIRQEDIRFADAPSPGAATLAG 300
              + R +     V + +G        + +  G  + V++R ED+R  +        + G
Sbjct: 256 ATTIDRIDEKRIRVDI-EGIESIVYYEDEVKAGDKLQVLLRPEDLRIEEIKESEEKGIVG 314

Query: 301 RVAMRSFVGARVQ 313
            V  R++ G  ++
Sbjct: 315 HVTDRTYKGMTLE 327