Pairwise Alignments

Query, 363 a.a., Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1) from Variovorax sp. SCN45

Subject, 388 a.a., Spermidine/putrescine ABC transporter ATP-binding subunit (NCBI) from Rhodospirillum rubrum S1H

 Score =  256 bits (654), Expect = 7e-73
 Identities = 139/332 (41%), Positives = 200/332 (60%), Gaps = 4/332 (1%)

Query: 2   PALTLDRLEKRYPGHVAASSVSLSVHDGEFISLLGPSGCGKTTVLRMVAGLIEPTGGRIL 61
           P + ++ + K++    A + VSL V +GEF+ LLG SGCGKTT+LRM+AG  +PT GRIL
Sbjct: 29  PIIEIETVVKKFGDFTAVAGVSLDVFEGEFLCLLGGSGCGKTTLLRMMAGFEQPTSGRIL 88

Query: 62  VDGRDITALPTNRRNIGLVFQSYALFPHMSVFENVAFGLRRQGMQGSELKQRVDQALASV 121
           +DGRD+T +P   R + ++FQSYALFPHMSV +N+AFGL++ GM  +E + RV + L+ V
Sbjct: 89  IDGRDMTGVPPYDRPVNMMFQSYALFPHMSVEQNIAFGLKQDGMPKAEREARVAEMLSLV 148

Query: 122 RLSALGDRMPKQLSGGQQQRVAVARSIAPRPSILLFDEPLSNLDASLRDEMQIELKRLQR 181
           +L     R P QLSGGQ+QRVA+ARS+A  P +LL DEPLS LD  LR+  Q++L  +Q 
Sbjct: 149 QLERFAKRKPHQLSGGQRQRVALARSLAKHPRVLLLDEPLSALDKKLRERTQLDLVNIQE 208

Query: 182 EVGITTLFVTHDQGEAMSMSDRVCVLAHGVVQQFDTPEAIYHRPATGFVASFIGRPNRLT 241
           + GIT + VTHDQ EAM+M+DRV ++  G + Q D P+++Y  P T FVA F G  N   
Sbjct: 209 KTGITFVVVTHDQEEAMTMADRVAIMDEGWIVQIDAPQSMYEYPNTRFVAEFFGSVNMFE 268

Query: 242 GRVVRANGASAAVQLD--DGPMLPASAAEGMVQGAAVDVVIRQEDIRF-ADAPSPGAATL 298
           G +V        ++    + P+       G  +GA V   +R E +    + P       
Sbjct: 269 GVLVEDEPDHVMIEAPELENPIYVGHGVSGH-EGATVWAALRPEKVTLVTEKPDRPYNWA 327

Query: 299 AGRVAMRSFVGARVQYLLAFGGTELIAEAVTN 330
           AG V    ++G+   Y++     + +   V N
Sbjct: 328 AGEVKDIVYLGSTSTYIVGLDTGKRMRVTVAN 359