Pairwise Alignments

Query, 363 a.a., Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1) from Variovorax sp. SCN45

Subject, 366 a.a., ABC transporter component (NCBI) from Rhodospirillum rubrum S1H

 Score =  265 bits (676), Expect = 2e-75
 Identities = 153/324 (47%), Positives = 200/324 (61%), Gaps = 7/324 (2%)

Query: 1   MPALTLDRLEKRYPGHVAASSVSLSVHDGEFISLLGPSGCGKTTVLRMVAGLIEPTGGRI 60
           M  L L  L K +      S  +L+V  GEF+S LGPSGCGKTTVLRM+ G   P+ GRI
Sbjct: 14  MAYLDLKDLHKAFGAARVVSDFTLAVERGEFVSFLGPSGCGKTTVLRMIGGFETPSSGRI 73

Query: 61  LVDGRDITALPTNRRNIGLVFQSYALFPHMSVFENVAFGLRRQGMQGSELKQRVDQALAS 120
           L+DG+D+TAL   RR +G+VFQ+YALFP+++V ENVAFGL+      S+  +RVD+ L  
Sbjct: 74  LIDGQDVTALTPARRKVGMVFQAYALFPNLTVAENVAFGLKVAREPASQTARRVDEMLEL 133

Query: 121 VRLSALGDRMPKQLSGGQQQRVAVARSIAPRPSILLFDEPLSNLDASLRDEMQIELKRLQ 180
           ++L  L DR P QLSGGQQQRVA+AR++A RP ILL DEPLS LDA +R  ++ E++ +Q
Sbjct: 134 IKLPQLKDRYPYQLSGGQQQRVALARALAVRPKILLLDEPLSALDAKIRVSLREEIRAVQ 193

Query: 181 REVGITTLFVTHDQGEAMSMSDRVCVLAHGVVQQFDTPEAIYHRPATGFVASFIGRPNRL 240
           RE+GITT+FVTHDQ EA+SMSDRV V+ +G   Q   P  IY+ P T FVASF+G  N L
Sbjct: 194 RELGITTVFVTHDQEEALSMSDRVVVMHNGRADQVGAPFEIYNAPKTRFVASFVGTLNLL 253

Query: 241 TGRVVRANGASAAVQLDDGPMLPASAAEGMVQGAAVDVVIRQEDIRFADAPSPGAAT-LA 299
            G  +    A   + ++   +       G   GA V + +R E I     P+P     L 
Sbjct: 254 EGVAL----APDRLTIEGQGITTTRGLAGAAVGATVSLALRPEAI--GPLPTPERTNKLE 307

Query: 300 GRVAMRSFVGARVQYLLAFGGTEL 323
             V    F GA V+  +A G   L
Sbjct: 308 ATVVDVGFQGALVRVKVAVGRQSL 331