Pairwise Alignments

Query, 363 a.a., Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1) from Variovorax sp. SCN45

Subject, 418 a.a., ABC transporter related (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  278 bits (710), Expect = 2e-79
 Identities = 140/282 (49%), Positives = 185/282 (65%)

Query: 4   LTLDRLEKRYPGHVAASSVSLSVHDGEFISLLGPSGCGKTTVLRMVAGLIEPTGGRILVD 63
           L++ RL KR+    A + VS  V  G F S+LGPSGCGKTT+LRM+AG   P  G I + 
Sbjct: 29  LSVTRLVKRFEKFTAVNDVSFEVEQGRFFSILGPSGCGKTTLLRMIAGFESPDSGVIAIR 88

Query: 64  GRDITALPTNRRNIGLVFQSYALFPHMSVFENVAFGLRRQGMQGSELKQRVDQALASVRL 123
           GRD+  +  NRR + L+FQ  ALFP MSV ENVAFGL+R+GM G E+ +RV   L  V L
Sbjct: 89  GRDMAGIAPNRRPVNLIFQHLALFPMMSVAENVAFGLKRRGMAGGEISRRVQDVLERVGL 148

Query: 124 SALGDRMPKQLSGGQQQRVAVARSIAPRPSILLFDEPLSNLDASLRDEMQIELKRLQREV 183
              G +MP QLSGGQ+QRVA+AR +   P++LL DEPL  LD  LR++M++ELK LQ EV
Sbjct: 149 PGYGVKMPAQLSGGQKQRVAIARCLVLEPAVLLLDEPLGALDLKLREQMKVELKTLQAEV 208

Query: 184 GITTLFVTHDQGEAMSMSDRVCVLAHGVVQQFDTPEAIYHRPATGFVASFIGRPNRLTGR 243
           G T +++THDQ EA+ MSD V V+  G  +Q DTP  +Y RPA+ FVA F+G  N  +G 
Sbjct: 209 GTTFVYITHDQSEALVMSDHVAVMNAGRFEQVDTPRNLYRRPASAFVAGFVGETNVWSGT 268

Query: 244 VVRANGASAAVQLDDGPMLPASAAEGMVQGAAVDVVIRQEDI 285
           +  A G +  V+ D+G +  A  A G+ +G  VD+ IR E +
Sbjct: 269 LEEATGDAGLVRTDEGAVFRARVAAGLAKGTRVDMFIRPEAV 310