Pairwise Alignments

Query, 363 a.a., Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1) from Variovorax sp. SCN45

Subject, 376 a.a., sugar ABC transporter ATP-binding protein CymD from Klebsiella michiganensis M5al

 Score =  244 bits (624), Expect = 2e-69
 Identities = 142/341 (41%), Positives = 202/341 (59%), Gaps = 14/341 (4%)

Query: 1   MPALTLDRLEKRYP-GHVAASSVSLSVHDGEFISLLGPSGCGKTTVLRMVAGLIEPTGGR 59
           M  ++L ++EKRY  G  A   + L +HDGEF+  +GPSGC K+T LRM+AGL + +GG 
Sbjct: 1   MATVSLRKIEKRYENGFKAVHGIDLEIHDGEFMVFVGPSGCAKSTTLRMIAGLEDISGGE 60

Query: 60  ILVDGRDITALPTNRRNIGLVFQSYALFPHMSVFENVAFGLRRQGMQGSELKQRVDQALA 119
           I +  R +  LP   R I +VFQ+YAL+PH +VF+N+AFGL+ Q     E+K+RV+ A  
Sbjct: 61  IYIGNRKVNDLPPKDRGIAMVFQNYALYPHKTVFDNMAFGLKMQKRPKDEIKRRVEDAAE 120

Query: 120 SVRLSALGDRMPKQLSGGQQQRVAVARSIAPRPSILLFDEPLSNLDASLRDEMQIELKRL 179
            + ++ L  R PK++SGGQ+QRVAV R+I  +P + LFDEPLSNLDA LR  M++++ +L
Sbjct: 121 KLEITELLYRKPKEMSGGQRQRVAVGRAIVRKPDVFLFDEPLSNLDAKLRVSMRMKIAQL 180

Query: 180 QREV-----GITTLFVTHDQGEAMSMSDRVCVLAHGVVQQFDTPEAIYHRPATGFVASFI 234
            R +       T ++VTHDQ EA+++ DR+CVL HG + Q DTP  +Y+ P   FVASFI
Sbjct: 181 HRSLKEEGHPATMIYVTHDQTEALTLGDRICVLNHGNIMQVDTPTDLYNYPNNKFVASFI 240

Query: 235 GRPN-RLTGRVVRANGASAAVQLDDGP--MLPAS---AAEGMVQGAAVDVVIRQEDIRFA 288
           G P+  L    +R N     V++  G   ++P S     EG +    V   IR E I  A
Sbjct: 241 GSPSINLIDTAIRKNNERLYVEIAPGVEILIPHSKQVLLEGYI-NKPVCFGIRPEHISLA 299

Query: 289 DAPSPGAATLAGRVAMRSFVGARVQYLLAFGGTELIAEAVT 329
            +      T  G + +   +G+        GG ELIA   T
Sbjct: 300 -SDDDDLNTFEGVLTVVENMGSEKFLYFIVGGKELIARVDT 339