Pairwise Alignments

Query, 283 a.a., ABC transporter, permease protein 1 (cluster 1, maltose/g3p/polyamine/iron) from Variovorax sp. SCN45

Subject, 286 a.a., spermidine/putrescine ABC transporter permease PotB from Vibrio cholerae E7946 ATCC 55056

 Score =  147 bits (370), Expect = 3e-40
 Identities = 79/251 (31%), Positives = 138/251 (54%), Gaps = 2/251 (0%)

Query: 19  LLLAFVAPVLLMVPLSLHPYEPGTGISAGWTLANYTSIVTDEYYREVVVRTLVLGFGVTA 78
           L+L  + P L+++  S    +    I   +T  NYT ++ D  Y +V++ +  +    T 
Sbjct: 20  LVLFVLIPNLMIIGTSFLTRDEANLIKFAFTFENYTRLL-DPLYGKVMLHSFYMAIVATL 78

Query: 79  ICLLLGYPLAYYIANAGPRMRLALTMLVIFPMLLNLVVRSFGWIALLANRGLVNNLLIDI 138
           ICL++GYP AY +A    + R  +  L+I P   N ++R++G   +L  +G++N  L+ +
Sbjct: 79  ICLVIGYPFAYIVAKMPEKWRPFMLFLIIVPFWTNSLIRTYGLKIVLGTQGILNQALMSL 138

Query: 139 GLIERPIKMMFNLFGLLVGMSHIFLPFMVLMLVPAIQAISKDVQAAAYTLAASRLRVFWS 198
           GLI+ P+++MF    +++G+ +I LPFM+L L  AI+ +      AA  L A++ +    
Sbjct: 139 GLIDAPLRIMFTETAVMIGLVYILLPFMILPLYSAIEKLDGTYIEAARDLGANKFQTLVR 198

Query: 199 ITLPMSAPGILSGSILVFVLTISALVTPRMLGGPTYKVMATLIYDDFLQTLDWPAGAAMS 258
           + LP++ PGI+ G +LV +  +       +LGG    ++  +I    L   DWP GAA S
Sbjct: 199 VILPLTMPGIIGGCLLVLLPALGMFYIADLLGGAKNLLIGNVIKSQVLNARDWPFGAATS 258

Query: 259 FALTALTLAVI 269
            ALT L +A++
Sbjct: 259 IALT-LAMAIM 268