Pairwise Alignments

Query, 283 a.a., ABC transporter, permease protein 1 (cluster 1, maltose/g3p/polyamine/iron) from Variovorax sp. SCN45

Subject, 330 a.a., Binding-protein-dependent transport systems inner membrane component (NCBI) from Rhodospirillum rubrum S1H

 Score =  149 bits (377), Expect = 6e-41
 Identities = 81/264 (30%), Positives = 142/264 (53%), Gaps = 13/264 (4%)

Query: 19  LLLAFVAPVLLMVPLSLHPYEPGTG-------------ISAGWTLANYTSIVTDEYYREV 65
           LLL FV P  +++ +S   +  G               +     L+NY  ++ DE Y   
Sbjct: 49  LLLFFVLPFAIVLKISFAEFRVGVPPYTALIDFTQDAYLRLTLALSNYKYMLDDEMYVIA 108

Query: 66  VVRTLVLGFGVTAICLLLGYPLAYYIANAGPRMRLALTMLVIFPMLLNLVVRSFGWIALL 125
            + +L +    T + LL+GYP+AY IA A    R  L  LVI P   + ++R + W+ +L
Sbjct: 109 YLNSLRIAGISTVLALLIGYPMAYGIARAPKGPRTILLFLVILPFWTSFLIRVYAWMGIL 168

Query: 126 ANRGLVNNLLIDIGLIERPIKMMFNLFGLLVGMSHIFLPFMVLMLVPAIQAISKDVQAAA 185
              GL+N  LI  G+I++P+ +M   + + +G+ + +LPFMVL L   ++ +   +  AA
Sbjct: 169 KGNGLLNTFLIWTGVIDQPLTIMGTEWAVFIGIVYSYLPFMVLPLYATLEKLDPSLLEAA 228

Query: 186 YTLAASRLRVFWSITLPMSAPGILSGSILVFVLTISALVTPRMLGGPTYKVMATLIYDDF 245
           + L     + F +ITLP+S PGI++GS+LVF+ ++   V P +LGG    ++  +++++F
Sbjct: 229 HDLGCRPWKAFLTITLPLSVPGIIAGSMLVFIPSVGEFVIPELLGGADTFMIGRVLWNEF 288

Query: 246 LQTLDWPAGAAMSFALTALTLAVI 269
               DWP  +A++ A+  + +  I
Sbjct: 289 FLNRDWPVASAVAVAMLLMLVVPI 312