Pairwise Alignments

Query, 263 a.a., Spermidine Putrescine ABC transporter permease component potC (TC_3.A.1.11.1) from Variovorax sp. SCN45

Subject, 275 a.a., ABC-type spermidine/putrescine transport system, permease component II from Pseudomonas stutzeri RCH2

 Score =  167 bits (424), Expect = 2e-46
 Identities = 88/239 (36%), Positives = 145/239 (60%), Gaps = 1/239 (0%)

Query: 18  VVVFLQIPVLVVVLAAFSKTAYLTIPPKGLTFHWFEVVLRDPEYLGAAWTSLWLAAASTA 77
           V++FL +PVLV+V  +F+  ++L  P +G +  W+E +    +++ +   S+ +A A+T 
Sbjct: 24  VLLFLIVPVLVIVPLSFNSGSFLVYPLQGFSMRWYEALFSSADWMRSLKNSMLIAPAATF 83

Query: 78  AALVLGLIAAYAIHRRMVPGAAALTSLFMAPLILPSVVLGVALLQYYTMTGLRGNSLGLW 137
            A+VLG +AA  + R    G A L ++ ++P+++P V++GVA   ++   G+  + L L 
Sbjct: 84  LAVVLGTLAAVGLTRAEFRGKALLMTILISPMVVPVVIIGVASYLFFAPLGMGNSYLSLI 143

Query: 138 LAHVVITVPYVVRASLGSLSSVDESLEDAARVLGADGFTSFRLVTLPLVKPGLVAGGLFA 197
           L H V+ VP+V+     +L   + +L  AA  LGA   T+F  VTLPL+ PG+++G LFA
Sbjct: 144 LVHAVLGVPFVIITVSATLQGFNYNLVRAAASLGASPLTAFFRVTLPLIAPGVISGALFA 203

Query: 198 FITSLDNVPVSVFLLSASQTTLPVKIFTSVEQGVDPSVAAVSTLLIVTTGIVLLLAERW 256
           F TS D V V++FL    Q TLP ++F+ + + + P++AA +TLLI    I LLL   W
Sbjct: 204 FATSFDEVVVTLFLAGPEQITLPRQMFSGIRENLSPTIAAAATLLI-GFSIALLLTLEW 261