Pairwise Alignments

Query, 263 a.a., Spermidine Putrescine ABC transporter permease component potC (TC_3.A.1.11.1) from Variovorax sp. SCN45

Subject, 256 a.a., spermidine/putrescine ABC transporter permease PotC from Vibrio cholerae E7946 ATCC 55056

 Score =  132 bits (331), Expect = 9e-36
 Identities = 70/238 (29%), Positives = 135/238 (56%), Gaps = 2/238 (0%)

Query: 18  VVVFLQIPVLVVVLAAFSKTAYLTIPPKGLTFHWFEVVLRDPEYLGAAWTSLWLAAASTA 77
           V +FL +P++V++  +F++  +  I   G T  W+  ++ +   + AAW S+ +A  S  
Sbjct: 13  VYLFLYLPIIVLIANSFNENKF-GIKWGGFTTKWYHALMNNDSLMQAAWHSINVAVFSAT 71

Query: 78  AALVLGLIAAYAIHRRMVPGAAALTSLFMAPLILPSVVLGVALLQYYTMTGLRGNSLGLW 137
           AA ++G + A A+ R    G   ++ +    ++ P +V+ ++LL  + + G +     L 
Sbjct: 72  AATLIGSLTAVALFRYQFKGKKVVSGMLFVVMMSPDIVMAISLLALFLVMGAKLGFFTLL 131

Query: 138 LAHVVITVPYVVRASLGSLSSVDESLEDAARVLGADGFTSFRLVTLPLVKPGLVAGGLFA 197
           +AH+   +P+VV      L+  D  + +AA+ LGA  +   + + LPL KP + AG L +
Sbjct: 132 IAHITFCLPFVVVTVYTRLNGFDVKMLEAAKDLGAGEWVILKKIILPLAKPAVAAGWLLS 191

Query: 198 FITSLDNVPVSVFLLSASQTTLPVKIFTSVEQGVDPSVAAVSTLLIVTTGIVLLLAER 255
           F  SLD+V +S F+   +   LP+KI++ V+ G+ P V A++T+++V + +VL++A +
Sbjct: 192 FTLSLDDVIISSFVTGPTYEILPLKIYSMVKVGISPEVNALATVMLVVS-LVLVVASQ 248