Pairwise Alignments

Query, 370 a.a., Lipopolysaccharide export system permease protein LptG from Variovorax sp. SCN45

Subject, 353 a.a., Predicted permeases from Pseudomonas stutzeri RCH2

 Score =  160 bits (404), Expect = 6e-44
 Identities = 105/365 (28%), Positives = 174/365 (47%), Gaps = 20/365 (5%)

Query: 6   RLIYVEVLKSVAFVTLGFLSLFFFFDFVDELQSIGKPDSLNYGPMQALIYVALLIPSHLY 65
           R I + V  ++  V    + L   F F+DEL  +       YG   AL YV L  P  LY
Sbjct: 6   RYIGIHVFLAILTVLGIIVGLALLFAFIDELGDVQG----GYGLGDALQYVLLTSPRRLY 61

Query: 66  ELLPITVLIGSIFVMARLAQSSEYTILRTSGLGPWRALRTLLLLGLSFVVLTFAIGDYVA 125
           E+LP+  LIG +  +  LA SSE TI+R +G+   R +  ++   L  +V    IG+YVA
Sbjct: 62  EMLPMAALIGCLIGLGTLASSSELTIMRAAGVSLGRIVMAVMKPMLVLLVAGILIGEYVA 121

Query: 126 PTSERTGQLLKARYQGT-YSLAGNTGAWLKEKRGDVSYAVNVLAIDRGGALKSPRIFEFD 184
           P +E   Q  ++  QG   + +   G W +++    +  V+V A+  GG L     + FD
Sbjct: 122 PATEDIAQARRSLAQGAGEAQSSKRGLWHRQE----NEFVHVNAVQPGGVLVGVTRYRFD 177

Query: 185 DKGYIKTQTLAASARIGGDGHWILTDVDQQHYDTQGAADRAHIVSTKIPELNWPTSLTAE 244
           D+  ++  + A  A   GD HW L ++   H+         H    + PE  W   LT +
Sbjct: 178 DERRLQASSFARRATYQGD-HWKLENISTTHFRGD------HTEVLRAPEERWDVQLTPQ 230

Query: 245 MVSVALLRPDRMSTIDLFDYIRHLDANGQTAQRYEIEFWRKVFYPLSCLVMVVLALPFAY 304
           ++   ++ P+ +S   L+ YI +L   G    RY + FW KV  P   + +V+LA+ F +
Sbjct: 231 LLGTVVMEPEALSITGLWRYIHYLGEQGLNNGRYWLAFWTKVLQPAVTVALVLLAISFIF 290

Query: 305 LHFRQAGITTYVFGGVMIGISFFLLNNVFGYLGNLGNWSPWLTAAAPGLIYSVMSLTAFS 364
              R   +   +F GV++G  F ++ ++ G    +  +SP L    P  + +++     +
Sbjct: 291 GPLRSVTLGQRIFTGVVVGFVFRIIQDLLGPASQVFGFSPLLAVVLPASVCALIG----A 346

Query: 365 WLVLR 369
           WL+ R
Sbjct: 347 WLLRR 351