Pairwise Alignments

Query, 370 a.a., Lipopolysaccharide export system permease protein LptG from Variovorax sp. SCN45

Subject, 356 a.a., LPS export ABC transporter permease LptG from Vibrio cholerae E7946 ATCC 55056

 Score =  142 bits (359), Expect = 1e-38
 Identities = 85/350 (24%), Positives = 169/350 (48%), Gaps = 14/350 (4%)

Query: 12  VLKSVAFVTLGFLSLFFFFDFVDELQSIGKPDSLNYGPMQALIYVALLIPSHLYELLPIT 71
           ++ + A V + F+ L     +V++L+ +G+    +Y  +QAL++V L IP  +    P+ 
Sbjct: 13  IVATTALVLVTFVGLSGIIKYVEQLRKVGEG---SYDLLQALLFVVLSIPRDVEMFFPMA 69

Query: 72  VLIGSIFVMARLAQSSEYTILRTSGLGPWRALRTLLLLGLSFVVLTFAIGDYVAPTSERT 131
            L+G++  +  LA SSE  +++ +G        ++L   +  +++   +G++ AP +++ 
Sbjct: 70  ALLGALIGLGALASSSELVVMQAAGFSKLDIGLSVLKTAIPLMIIVTLLGEWGAPQAQKM 129

Query: 132 GQLLKA-RYQGTYSLAGNTGAWLKEKRGDVSYAVNVLAIDRGGALKSPRIFEFDDKGYIK 190
            + ++A    G   ++  TG W ++    +      +A      L    ++ FD+   + 
Sbjct: 130 ARDMRAFATSGGAIMSVRTGVWARDANDFI-----FIAKVENEHLYGLNLWRFDENKKLS 184

Query: 191 TQTLAASARIGGDGHWILTDVDQQHYDTQGAADRAHIVSTKIPELNWPTSLTAEMVSVAL 250
           T   +       +  W++ D            +   I    +PE  W TSL  + ++V  
Sbjct: 185 TVIFSEQVDYVANNEWLMKDAVLTRL-----VNDIEISKESLPEYRWRTSLAPDKLAVVT 239

Query: 251 LRPDRMSTIDLFDYIRHLDANGQTAQRYEIEFWRKVFYPLSCLVMVVLALPFAYLHFRQA 310
           ++P+ +S   L DY+ +L A+ Q + RYE+  WRKV  P+S  VM+++AL F +   R  
Sbjct: 240 VKPEELSLTGLSDYVHYLKASEQDSSRYELALWRKVTQPISIAVMMLMALSFIFGPLRSV 299

Query: 311 GITTYVFGGVMIGISFFLLNNVFGYLGNLGNWSPWLTAAAPGLIYSVMSL 360
            +   +  GV+ G SF++ +  FG L  +    P   A AP L++  ++L
Sbjct: 300 TMGARILSGVIAGFSFYISSEFFGPLSLVYGLPPLFGALAPSLVFLAIAL 349