Pairwise Alignments

Query, 476 a.a., putative amidase from Variovorax sp. SCN45

Subject, 485 a.a., Amidase (NCBI) from Rhodospirillum rubrum S1H

 Score =  232 bits (592), Expect = 2e-65
 Identities = 174/485 (35%), Positives = 241/485 (49%), Gaps = 26/485 (5%)

Query: 4   DSLFFTPATELLGMIRARQLSPVELVTAVLARAERLQPVLNCFINLTP-ERALAEARRAE 62
           D +    A  L   I  R +S  E++ A LAR +R  P +   ++L   E  L EA   +
Sbjct: 6   DDILAGDARALSRRIHHRAVSCREVMAATLARIDRFNPAVTALVSLRDREDLLREADAKD 65

Query: 63  ADIVAGRPLGRLHGIPFTVKDLVNTEGVPTTFGAVVHRDNVPAEDAVSVARLRAEGAILI 122
           A +  G   G LHG P   KDL  T G+ TT G+ + R  +P +DA+ V RLRA GAI +
Sbjct: 66  ALLGKGLSQGPLHGFPQAPKDLAATRGIATTRGSPLFRHQIPKQDAIFVERLRAGGAIFV 125

Query: 123 GKTTTPEFGSGPMTNSPLFGSTRNPWDLSRTSGGSSGGAAAATAAGIAPLAIATDGGGST 182
           GKT TPEFG G  T +P+FG+T N +D   T+GGSSGGAA A A G+  +A  +D  GS 
Sbjct: 126 GKTNTPEFGLGSQTYNPVFGATGNAYDPRLTAGGSSGGAACALALGMLAVADGSDMMGSL 185

Query: 183 RIPAACNGVVGLKQSNGVIPHSQAQDLFANQT-YVTPTTRTVADTALMLQVMAGPSAVDP 241
           R PAA N V G + S G +PH    DLF  Q  Y  P  R+VAD AL+L VMAG  A  P
Sbjct: 186 RNPAAFNNVFGFRPSAGRVPHGVVPDLFFQQLGYDGPMGRSVADLALLLSVMAGFDARAP 245

Query: 242 WSLGLRAHDYVKESVP-EGDLRGKHLLYCLTPSG-RPVSRDVTEGFSAALQTLASLGATL 299
            SL   A D    + P EG + G  + +     G       + E    AL TL  LG  +
Sbjct: 246 QSL---AGDPAVFAQPLEGSVAGVRVGWLGDLGGYLAFEPGILELCQGALATLGDLGCVV 302

Query: 300 EPFDSSGFDVEPIWRAINHTVWRARFAPLVEKH-PDSFSDTFKR---------QIASAAH 349
           +   ++GF ++ +W     T W    + LV       ++D  KR         +I     
Sbjct: 303 DE-ATAGFPLDALW-----TAWTDLRSFLVAGDLGPLYADPVKRAQMKPEAIFEIERGLA 356

Query: 350 VSGVEYQEAMFARSALFKRVQGLLAKADALVMPTLTRSALPLGQDLFGTIDIDGQQFDNV 409
           +SG +   A   RSA ++R+  L  + D L +P  +    P          I G+  D+ 
Sbjct: 357 LSGPQVFAASARRSAWYRRMLVLFERFDVLALP--SAQVFPFEHATPWPRAIAGRTMDSY 414

Query: 410 RAHWYPWTMLFNMTGHPAISVPMGFGRDAMPLGLQLVGRFHGDAELLQMAGQFEAAVDLG 469
              W    +  +M G P ISVP+GF    +P+GLQ++G+   D  LL++A  ++ A    
Sbjct: 415 H-RWMEVVVPASMAGVPVISVPVGFNAAGLPMGLQVIGKPRDDLSLLRLAHAYDLATRWP 473

Query: 470 ARRPP 474
           ARRPP
Sbjct: 474 ARRPP 478