Pairwise Alignments

Query, 780 a.a., VgrG protein from Variovorax sp. SCN45

Subject, 694 a.a., type VI secretion system tip protein VgrG from Vibrio cholerae E7946 ATCC 55056

 Score =  282 bits (722), Expect = 4e-80
 Identities = 204/632 (32%), Positives = 304/632 (48%), Gaps = 54/632 (8%)

Query: 14  EQLKFRAMRGQEGLSQL---------FEFEVDMVGTSFNIELKQLLGTSLTLELADDGGP 64
           E L  R   GQE LS           F +++ +     N+   Q++     L+L      
Sbjct: 16  ETLVVRGFHGQESLSNSVFLGQACYGFRYQMQLASRVSNLTADQMVDKRAELKL------ 69

Query: 65  RFLNGTVV-RFELVGRANETG----RHYIYRALVQPWLWYLTRTTDCRIFQNKSVPEVLD 119
            + N  +V R   + RA   G     H  Y+  + P L  L+   + RIFQ ++VPE+L 
Sbjct: 70  -YRNSQLVQRVHGIVRAFSQGDIGHHHTFYQLTLVPALERLSLRHNSRIFQKQTVPEILS 128

Query: 120 EVLGKYGF-EFEKRLTASYRPWENCVQYQESDFAFVSRLMEHEGIAYHFEHGNGTHLLVL 178
            +L + G  ++   L       E CVQY+ESD  F+ RL   EG+ Y F H  G H L  
Sbjct: 129 ILLQEMGIHDYAFALKRDCVQREFCVQYRESDIDFLHRLAAEEGLVYSFVHEAGKHTLYF 188

Query: 179 SDDTGGYSPLPG---HATIAYRPRDRVLNAMEPCIDQWRVSEQITSGRVMLDDFDFKKSR 235
           SD +   S LP    +  +A    D       P I       Q     V L D+ FKK  
Sbjct: 189 SDASDSLSKLPEPIPYNALAGGTMDT------PYIHGLTYRTQAEVSEVQLKDYSFKKPA 242

Query: 236 AS-LQSVQQDPKGHDHSTYEVYEWLGGYSEHQQGDAYAKIRLQELQCAHELARGHTNVVG 294
            S LQ+VQ     +  + Y+ ++  G Y +   G A+++IRL  L+     A G +N   
Sbjct: 243 YSFLQTVQGTELDYQQTRYQHFDAPGRYKDDVNGAAFSQIRLDYLRRHAHTATGQSNEPL 302

Query: 295 MAPGYLFQMTHCPREADNREYLVTETRYDLQEPE--YSSGGSSESVCEFDFTVLPSSVAY 352
           +  GY F +      A NR+++V    +  ++P+     GGS  +     F+++P  + +
Sbjct: 303 LRAGYKFDLQEHLDPAMNRDWVVVSINHQGEQPQALQEEGGSGATTYNNQFSLIPGHLHW 362

Query: 353 RPARNTPRPRTNGPQTATVVGPE--EIWTDRFGRVKLQFRWDRYGQGDENSSCWVRVSSS 410
           R A   P+P+ +GP  ATVVGPE  EI+ D  GRVK+ F WDRY  G+E SSCWVRVS  
Sbjct: 363 R-AEPQPKPQVDGPMIATVVGPEGEEIFCDEHGRVKIHFPWDRYSNGNEQSSCWVRVSQG 421

Query: 411 WAGANFGTMHMPRVGQEVIVDFIGGEPDRPIITGRVYNSDQMPPWELPANATASGILTRS 470
           WAG+ +G + +PR+G EVIV F+ G+PD+PIITGR Y++   PP+ LP + T + + T +
Sbjct: 422 WAGSQYGFIAIPRIGHEVIVSFLNGDPDQPIITGRTYHATNTPPYTLPEHKTKTVLRTET 481

Query: 471 SSGGAANQANMLRFEDRTGSEQIWLHAERNLDVEVEADETH--------TTDGTRTTLIK 522
             G   N+   L FED+ G EQI+LHA+++ D  +E D T         T +  + T IK
Sbjct: 482 HQGEGFNE---LSFEDQAGKEQIYLHAQKDFDGLIENDHTTVIRHDQHLTVENDQFTQIK 538

Query: 523 GHESATYQDGETRDITAGARETITGGDTRDVTGGFTETVSGGVNQTISGGKTRMLSGGLQ 582
            ++  T  +GE+R +      +  GG  +   G        G    +  G   +L  G +
Sbjct: 539 HNQHLTV-EGESRTLVKLDCSSEIGGSLQQKIGS-KAIYDAGTEVHLKAGNKLVLEAGNE 596

Query: 583 DTITGGVN--SAISGGYHGTIDGQEVRFVSAG 612
            TI  G +     +GG H  + G  +   S G
Sbjct: 597 LTIKAGGSFIKVDAGGVH--VVGSAINLNSGG 626