Pairwise Alignments

Query, 244 a.a., Ribonuclease PH (EC 2.7.7.56) from Variovorax sp. SCN45

Subject, 709 a.a., polyribonucleotide nucleotidyltransferase from Vibrio cholerae E7946 ATCC 55056

 Score = 53.1 bits (126), Expect = 1e-11
 Identities = 58/247 (23%), Positives = 102/247 (41%), Gaps = 26/247 (10%)

Query: 6   RSGGRAADQLRPVRITRGFTIHAEGSVLIEFGQTRVLCTASV----EEKVPPHKKGSGEG 61
           R  GR  D +R + +  G      GS L   G+T+ L TA++    + ++     G  + 
Sbjct: 316 RIDGREKDMVRALDVRTGVLPRTHGSALFTRGETQALVTATLGTQRDAQIIDELTGEKKD 375

Query: 62  WVTAEYGMLPRATHTRSSREAAKGKQTGRTQEIQRLIGRSMRAVFDLAALGERTIHLDCD 121
                Y   P          + K ++ G      RL  R + AV         T+ +  +
Sbjct: 376 HFLLHYNFPPYCVGETGFVGSPKRREIGHG----RLAKRGIAAVMPSPEEFPYTVRVVSE 431

Query: 122 VLQADGGTRTAAITGAFVAAQDAVNKLIAAGTLAASPIKGHVAAISVGIV----EGTPLL 177
           + +++G +  A++ G+ +A  DA             PIK  VA I++G+V    +   L 
Sbjct: 432 ITESNGSSSMASVCGSSLALMDA-----------GVPIKASVAGIAMGLVKEENDFVVLS 480

Query: 178 DLEYTEDSACDTDMNVVMTGAG-HFVEVQGTAEGVAFTRDEMNSLLGLAEKGIGELVTLQ 236
           D+   ED   D D  V  T  G   +++    EG+  T++ M   L  A+     ++++ 
Sbjct: 481 DILGDEDHLGDMDFKVAGTATGVTALQMDIKIEGI--TKEIMQIALNQAKGARLHILSVM 538

Query: 237 KQALLAA 243
            QA+ AA
Sbjct: 539 DQAISAA 545