Pairwise Alignments

Query, 67 a.a., DNA-directed RNA polymerase omega subunit (EC 2.7.7.6) from Variovorax sp. SCN45

Subject, 90 a.a., DNA-directed RNA polymerase subunit omega from Vibrio cholerae E7946 ATCC 55056

 Score = 55.1 bits (131), Expect = 1e-13
 Identities = 31/64 (48%), Positives = 40/64 (62%), Gaps = 2/64 (3%)

Query: 1  MARITVEDCLTQIPNRFQLVLAATYRARMLSQGHAPKI--ESKNKPAVTALREIAEGKIG 58
          MAR+TV+D + +I NRF LVL A  RAR +  G    +  E  +KP V ALREI EG I 
Sbjct: 1  MARVTVQDAVEKIGNRFDLVLVAARRARQMQSGGKDALVPEENDKPTVIALREIEEGLIT 60

Query: 59 IEML 62
           ++L
Sbjct: 61 KDVL 64