Pairwise Alignments

Query, 405 a.a., ABC-type branched-chain amino acid transport systems, periplasmic component from Variovorax sp. SCN45

Subject, 372 a.a., leucine-specific binding protein from Sinorhizobium meliloti 1021

 Score =  239 bits (610), Expect = 1e-67
 Identities = 131/345 (37%), Positives = 192/345 (55%), Gaps = 9/345 (2%)

Query: 53  VKIGHVAPTSGPIAHLGKDNEMGAKMAIEDLNAKGIKIGDKTAKFELVAEDDAGDPKQGT 112
           + +G   P +GP A  G   + GA+ A ED+NA G   G    + ++V  DD  DPKQG 
Sbjct: 25  ILVGVGGPLTGPNAAFGAQLQKGAEQAAEDINAAG---GINGEQIKVVLGDDVSDPKQGV 81

Query: 113 AVAQKLVDEKVNGVVGHLNSGTTIPASKLYSDAGIPQISPSATNPKYTRQGFKTTFRVVA 172
           +VAQK V + V  VVGH NSG +IPAS++Y++ GI Q++P++TNP++T +G   TFR   
Sbjct: 82  SVAQKFVADGVKFVVGHFNSGVSIPASEIYAENGILQVTPASTNPQFTERGLWNTFRTCG 141

Query: 173 DDTQLGGTLGKYAVETLKGKNIAVIDDRTAYGQGVAEEFEKSAKAAGATIVGHEFTTDKS 232
            D Q G   G Y     K   +AVI D+T YGQG+A+E +KS   AG T   +E      
Sbjct: 142 RDDQQGAVAGAYIAANFKDAKVAVIHDKTPYGQGLADETKKSMNEAGVTEALYEGINTGD 201

Query: 233 TDFNAILTKLKSAKPDVLFFGGMDAVGGPMLKQVKQLGLNVKFMGGDGLCTGELPKLAGD 292
            DF+A++ K+K A   ++++GG+    G +++Q+K  GL    M GDG+ + EL  +AGD
Sbjct: 202 KDFSALIAKMKQAGVSIVYYGGLHTEAGLIMRQMKDQGLKATMMSGDGIVSNELASIAGD 261

Query: 293 AIGEDMVVCAEAGGVDGDFKQPLEDFKAKFKTKNGVEVQIYAPYVYDAVNVLAEAMVKAG 352
           A+   ++  A         K  +E F+A      G E + Y  Y Y A+ V+AE    AG
Sbjct: 262 AVDGTLMTFAPDPRKSPAAKDLVEKFRAA-----GFEPEAYTLYAYAALQVIAEGAKAAG 316

Query: 353 SSDPEKYLPEV-GKVQYKGVTGPIAFDEKGDIKNGALTLYTYKGG 396
           ++DP+     +  K  +K   G + FDEKGDI      +YT+K G
Sbjct: 317 NTDPQAVAEAIKAKGPFKTAIGELGFDEKGDITRPDYVMYTWKKG 361