Pairwise Alignments

Query, 405 a.a., ABC-type branched-chain amino acid transport systems, periplasmic component from Variovorax sp. SCN45

Subject, 363 a.a., Leu or Leu/Val/Ile transport binding protein from Sinorhizobium meliloti 1021

 Score =  179 bits (455), Expect = 9e-50
 Identities = 117/363 (32%), Positives = 178/363 (49%), Gaps = 11/363 (3%)

Query: 34  TAAAPAAAPAPAPAGDTLVVKIGHVAPTSGPIAHLGKDNEMGAKMAIEDLNAKGIKIGDK 93
           TAAA A A A     + L   IG   P SG +A  G     GA+MA+ ++NA G  +G +
Sbjct: 6   TAAALAFALASQSEAEVL---IGVAGPMSGKLAWTGTQLRRGAEMAVANINAAGGVLGQQ 62

Query: 94  TAKFELVAEDDAGDPKQGTAVAQKLVDEKVNGVVGHLNSGTTIPASKLYSDAGIPQISPS 153
                L+  DD  DP+Q  A A+KLV +    V+GH  SG +IPASK+Y+ AG+ QISPS
Sbjct: 63  V---RLIVADDFCDPRQALAAAEKLVADGAVFVIGHYCSGASIPASKIYAAAGVLQISPS 119

Query: 154 ATNPKYTRQGFKTTFRVVADDTQLGGTLGKYAVETLKGKNIAVIDDRTAYGQGVAEEFEK 213
           +TNP  T QG    FRV + D   G   G Y  +      IA++ D T YG+G+A+E +K
Sbjct: 120 STNPMLTEQGHANVFRVCSRDDAQGHKAGNYLADHWGDSKIAILHDNTTYGKGLADETKK 179

Query: 214 SAKAAGATIVGHEFTTDKSTDFNAILTKLKSAKPDVLFFGGMDAVGGPMLKQVKQLGLNV 273
                G T   ++  T    D++  +  L++A   VL+ GG       M++  +     V
Sbjct: 180 QLNMRGVTEAVYQSYTPGKDDYSVEVAALQTAHIAVLYLGGYHTEAALMVRAARDRAYPV 239

Query: 274 KFMGGDGLCTGELPKLAGDAIGEDMVVCAEAGGVDGDFKQPLEDFKAKFKTKNGVEVQIY 333
           + + GD   T     +AG A    +         + +  + +E F+A+       E   +
Sbjct: 240 QLISGDDTATEAFGLIAGPAAEGTLFTFVADPRRNAEAAEVVERFRAE-----NFEPDSW 294

Query: 334 APYVYDAVNVLAEAMVKAGSSDPEKYLPEVGKVQYKGVTGPIAFDEKGDIKNGALTLYTY 393
             + Y A  + A+A+ KA S D +  +  + + Q+  V G I FD+KGD+   +   Y +
Sbjct: 295 TLHSYGAAEIWAQAVTKANSLDLQAVIAALREDQFDTVLGRIDFDKKGDLTVQSWVWYVW 354

Query: 394 KGG 396
           K G
Sbjct: 355 KSG 357