Pairwise Alignments

Query, 405 a.a., ABC-type branched-chain amino acid transport systems, periplasmic component from Variovorax sp. SCN45

Subject, 378 a.a., branched-chain amino acid ABC transporter substrate-binding protein from Klebsiella michiganensis M5al

 Score =  103 bits (256), Expect = 1e-26
 Identities = 101/371 (27%), Positives = 158/371 (42%), Gaps = 30/371 (8%)

Query: 32  APTAAAPAAAPAPAPAGDTLVVKIGHVAPTSGPIAHLGKDNEMGAKMAIEDLNAKGIKIG 91
           A   A   AA   A +     +KIG V P SG ++  G+ ++ G  + I+ +    +K G
Sbjct: 8   ASLMATLVAAWVGASSAQAAEIKIGVVLPLSGALSGYGQPSQKGLDI-IQSITPT-LKNG 65

Query: 92  DKTAKFELVAEDDAGDPKQGTAVAQKLVD-EKVNGVVGHLNSGTTIPASKLYSDAGIPQI 150
           D     +L+  DD  D  +     Q+LV  +KV+ V+G + S  T+  +K+  D+  P +
Sbjct: 66  DTV---KLIVIDDKSDKVEAANAMQRLVSSDKVDAVIGEVTSSNTLAMTKIADDSKTPLV 122

Query: 151 SPSATNPKYTRQGFKTTFRVVADDTQLGGTLGKYAVETLKGKNIAVI-DDRTAYGQGVAE 209
           S +ATN + TR       RV   D+  G      A   LK K  A++ D    Y  G+A+
Sbjct: 123 SSTATNDRVTRN-HPYVSRVCFSDSFQGVVGANLASRDLKAKTAAIVFDSSNDYSVGLAK 181

Query: 210 EFEKSAKAAGATIVGHEFTTDKSTDFNAILTKLKSAKPDVLFFGGMDAVGGPMLKQVKQL 269
            F       G TI         S DF A L  +K+   D+++       G  +  Q KQL
Sbjct: 182 AFRTQFLKNGGTIPIEVQAPGGSKDFKAQLASVKAKNVDMIYMPIYYTEGALIAVQAKQL 241

Query: 270 GLNVKFMGGDGLCTGELPKLAGDAIGEDMVVCAEAGGVDGDFKQPL--------EDFKAK 321
           GL+   +GGDG        LA D +  D+   A  G +  D+  P         E F   
Sbjct: 242 GLSKPVVGGDG--------LAADQVFFDVGKDAVNGYMTTDYYSPNAKEQTPAGEVFIKA 293

Query: 322 FKTKNGVEVQIYAPYVYDAVNVLAEAMVKAGSSDPEKYLPEVGKVQ----YKGVTGPIAF 377
           ++ K       +     DA NV+  AM +   SDP   +    K++    ++GVTG +  
Sbjct: 294 WEAKYQQPTHTWGAMAADAYNVIINAMNQC--SDPHDRVCVNEKIRATKDFQGVTGTLTL 351

Query: 378 DEKGDIKNGAL 388
                I++  +
Sbjct: 352 QNGDAIRSAVI 362