Pairwise Alignments

Query, 560 a.a., DNA repair protein RecN from Variovorax sp. SCN45

Subject, 577 a.a., DNA repair protein RecN (NCBI) from Rhodospirillum rubrum S1H

 Score =  310 bits (794), Expect = 1e-88
 Identities = 211/569 (37%), Positives = 305/569 (53%), Gaps = 31/569 (5%)

Query: 3   LRRIALRDFVIVRSLELDLSGGFTVLTGETGAGKSILIDALQLALGNRADAGAVREGAER 62
           L  +++RD V++  L+L    G  V TGETGAGKSIL+D+L LALG RAD+  VR+GA +
Sbjct: 2   LSALSIRDVVLIERLDLAFGPGLGVFTGETGAGKSILLDSLSLALGARADSALVRKGAPQ 61

Query: 63  LDVSAEFD--ADPALATWLDEG--GFEAGDALLLRRTVDLQGRSRGWINGSPATATQLRE 118
           L VSAEF   AD      L     G +  + +++RR V   GRSR ++N  P +   LR+
Sbjct: 62  LSVSAEFTLAADHPARALLGAADLGVDGSEPVVVRRVVTADGRSRAYVNDQPTSVGLLRQ 121

Query: 119 LGDRLLDIHGQHAWQSLTRPDAVRGLLDAYAGVRTD-------ALDAAWQGWRQALSALE 171
           LG  +++IHGQ     L  P + RG+LD +AG  +        A++AA   W+ A++A  
Sbjct: 122 LGQSMVEIHGQFESHGLLDPASHRGVLDGFAGADSGQPAGLLPAVEAAHATWKAAVTARR 181

Query: 172 HARSAQDSLQRERERLQWQISEVAKLAPGADEWEELSTNHSRISNAQALIDAAQGASQAL 231
            A +     + E + L+   +E+  LA    E E L+   + + N + L +   GA  AL
Sbjct: 182 RAEADLARARAEEDLLRHTGTELEALAARPGEEEALAEERALLMNGEKLAEGLNGALGAL 241

Query: 232 ------EDEDNGALSALSRAAALLKNCEHIEPEFRNLGEVLASCVAQASDAAHSLHGYLR 285
                 E     A+ AL R A +  +          + E L     +A++A   L   + 
Sbjct: 242 SQPLPVETALRHAMRALERVAPMAGH------RLDGVIEGLERASVEAAEAQAQLQAVIG 295

Query: 286 DAEADPQSLAELDERMGLWMSLARRYKRTPAELPALLAGWQSELQALDAQSDL-DGLERA 344
             + DP+ L  ++ER+     LAR++  T   LPALL   + ++  L+   DL  GL +A
Sbjct: 296 ALDMDPRRLETVEERLFALRGLARKHGLTVDGLPALLEDIRRQIATLEGDEDLLGGLRKA 355

Query: 345 EQSAQQAYMKEAKALGKSRKQAAPRLAQAVTEAMQGLGMKGGRFEVDLQPLAQP--GRAG 402
           E++A+  Y++ A+AL + R+QAA  L +AV   +  L ++  RF   L+ L +   G AG
Sbjct: 356 EENARATYVEAARALSRVRRQAAGALDRAVAAELPPLKLERARFVTTLEDLPEDQWGAAG 415

Query: 403 LEEIAFLVAGHTGSTPRAIGKVASGGELSRIALAIAVTTSQLGAAQTLIFDEVDAGVGGA 462
           L+ +AFLVA + G  P  I K+ASGGEL+R  LA+ V  +  G   TLIFDEVDAG+GGA
Sbjct: 416 LDRVAFLVATNPGGDPGPIHKIASGGELARFMLALKVILAAGGDVPTLIFDEVDAGIGGA 475

Query: 463 VAETVGRLMKQLGRDRQVLAVTHLPQVAACADHHLVVAKRQTAAAGKEGPRTESGVSRLD 522
            A  VG  + +LG+  QVL VTH PQVAA    H  V K      GK G  T  GV  L 
Sbjct: 476 TAAAVGERLARLGQAVQVLVVTHSPQVAAMGQRHYRVLKSDD---GKGGFGT--GVDALS 530

Query: 523 EDNRAKEIARMLGGEKVSQTSLAHAREML 551
              R +E+ARML G  ++  + A AR +L
Sbjct: 531 PAERIEEVARMLAGAHITDQARAAARSLL 559