Pairwise Alignments

Query, 560 a.a., DNA repair protein RecN from Variovorax sp. SCN45

Subject, 559 a.a., DNA repair protein RecN from Marinobacter adhaerens HP15

 Score =  368 bits (945), Expect = e-106
 Identities = 220/555 (39%), Positives = 312/555 (56%), Gaps = 13/555 (2%)

Query: 3   LRRIALRDFVIVRSLELDLSGGFTVLTGETGAGKSILIDALQLALGNRADAGAVREGAER 62
           L ++ + ++ I   +EL  S G T LTGETGAGKSI++DAL LA+G RADAGAVR GA+R
Sbjct: 2   LTQLTVSNYAIAERVELQFSKGMTALTGETGAGKSIVLDALGLAMGGRADAGAVRHGAKR 61

Query: 63  LDVSAEFDAD--PALATWLDEGGFEAGDALLLRRTVDLQGRSRGWINGSPATATQLRELG 120
            D++A FD    P    WL E   +  +  +LRR +   GRSR +ING P     L+ELG
Sbjct: 62  ADITATFDVSGIPEATEWLAEHELDDDNDCILRRVISKDGRSRAYINGQPCPLNHLKELG 121

Query: 121 DRLLDIHGQHAWQSLTRPDAVRGLLDAYAGVRTDALDA--AWQGWRQALSALEHARSAQD 178
             L+DIH QH  QSL R +  R L+D +AGV T A +   AW+ W Q    L   +   D
Sbjct: 122 GVLMDIHSQHQHQSLLRKETHRKLVDEFAGVETLAAETREAWKSWNQIRQRLTERQQNAD 181

Query: 179 SLQRERERLQWQISEVAKLAPGADEWEELSTNHSRISNAQALIDAAQGASQALEDEDNGA 238
             + + + L++Q+ E+ +LA  A E E L    +++S A  ++  +  A+    +++  A
Sbjct: 182 EAEAKLQLLRYQVEELDRLALEAGEQENLEQEQAQLSQADTVLHNSHQAALLCTEDETSA 241

Query: 239 LSALSRAAALLKNCEHIEPEFRNLGEVLASCVAQASDAAHSLHGYLRDAEADPQSLAELD 298
           +  + +A   L+      P   +  ++L     Q S+A  +L  ++ D EADP  LAE++
Sbjct: 242 VDLVRQALQQLEQLPVDVPALADTIQMLNEAQIQISEAGDNLRHFVEDYEADPARLAEVE 301

Query: 299 ERMGLWMSLARRYKRTPAELPALLAGWQSELQALDA-QSDLDGLERAEQSAQQAYMKEAK 357
           ER+     +AR+++ TP ELP L     +EL  LD  +  L+ L     S +  + + A 
Sbjct: 302 ERLSAIYQMARKHRITPEELPELHQRLSAELAELDGGEGSLEQLAAELDSQRGRFDELAA 361

Query: 358 ALGKSRKQAAPRLAQAVTEAMQGLGMKGGRFEVDLQPL--AQPGRAGLEEIAFLVAGHTG 415
            L ++R +AA  L Q V   +  L M   +F   L      +P   GLEEI FLV+ + G
Sbjct: 362 ELSEARARAAAELDQRVAAELTQLSMPNMQFITHLNRSNGGEPAPHGLEEIEFLVSANPG 421

Query: 416 STPRAIGKVASGGELSRIALAIAVTTSQLGAAQTLIFDEVDAGVGGAVAETVGRLMKQLG 475
              R + KVASGGELSRI+LAI V  +Q     TL+FDEVD G+GG  AE VGRL++ LG
Sbjct: 422 QPARPLAKVASGGELSRISLAIQVVVAQTSTTPTLVFDEVDVGIGGGTAEVVGRLLRTLG 481

Query: 476 RDRQVLAVTHLPQVAACADHHLVVAKRQTAAAGKEGPRTESGVSRLDEDNRAKEIARMLG 535
            + QVL VTHLPQVAA    HL V+K        E   T S +  LD+  R  E+ARMLG
Sbjct: 482 GNGQVLCVTHLPQVAAQCHQHLFVSK------FTEQDATFSKIETLDDQGRISEVARMLG 535

Query: 536 GEKVSQTSLAHAREM 550
           G  +++ ++AHAREM
Sbjct: 536 GVDMTEHTIAHAREM 550