Pairwise Alignments

Query, 497 a.a., ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 543 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

 Score =  135 bits (341), Expect = 3e-36
 Identities = 127/526 (24%), Positives = 227/526 (43%), Gaps = 64/526 (12%)

Query: 4   RRTLLATGAAALTPLALPTIALAQ------RKKDALVIGLTLEPTGLDPTAKAGAEIAEV 57
           RR  L +  A  T  A+P + +         +  ++ I +  EP  L   A + A  A  
Sbjct: 13  RRAFLLSSVALATATAMPVLPVPSFAAEEPTRGGSVSINIGTEPPVLVLIAHS-AGAAYY 71

Query: 58  VLYTVFETLTKINSDGGVTPLLAESWEVSPDLKTYTFKLRRGVKFQNGEPFNAQSVKFSF 117
           +     E+L   + D    PLLA  W VS D   Y FKLR+ V++ +G  F A++V FS 
Sbjct: 72  ISGKATESLLSYDKDFNPQPLLATEWTVSEDGLRYWFKLRQDVRWHDGRDFTAEAVAFSI 131

Query: 118 DRAAAANSTNKDKRTFTNIA-TQVVDEHTVVLINKEIEPDLLFLLGQASAILVEPKSVE- 175
              A   +  + + TF ++    V++ H V L   +  P LL       A +V     E 
Sbjct: 132 --LALKENHPRGRATFAHVKEANVLNSHEVELTLAKPAPYLLTAFASFEAPIVPKHLYEG 189

Query: 176 ------TNATKPVGTGPYRLDNWAKGSSIVLAKWDGWRGADTVQIRKATFRFISEPAAQT 229
                  +   PVGTGPY+   W +GS  +  + + + G+    + +  FRFI +PAA  
Sbjct: 190 TKIAENPHNVAPVGTGPYKFVEWVRGSHALFVRNEDYWGSPKPYLDQIIFRFIVDPAAAV 249

Query: 230 AALLSNDIDLFPHASVSRSLSQFQNDKRFQI-----VFNASLGKTILAINNKRKPLDDVR 284
           AA+ + ++ +         + + + +    +      ++ S+ +    + NK   L D++
Sbjct: 250 AAIETGEVQVSTANLPLTDIDRLKANPNLVVDTDPAPYSPSIARAEFNLENKY--LADIK 307

Query: 285 VRRAISAAIDRKAVIDAA-------VDGRGVP-IGSHYVPGLPGYVDTTGVNPYNIEKAK 336
           VR AI+ A+D+  +++         +DG   P +   Y P LP Y        ++  K++
Sbjct: 308 VRHAIAHAVDKDFIVNTVYLGYATRLDGPVSPDLAKFYSPDLPKY-------EFDPAKSE 360

Query: 337 KLLAEAGVKTPLE---LELVLPP-----PPYARQGGELIAAQLAKIGIVAKIQNVEWAQW 388
           KLL EAG     +    +L + P     PP  +Q  E IA  LAK+GI  +++  ++A +
Sbjct: 361 KLLDEAGYARGADGFRFKLFIDPTQPSGPP--KQTAEYIAQALAKVGIKVELRTQDFATF 418

Query: 389 ISGTYGNKNYDLSLILHVEPFDLVNYTKPEYYWG--------------YQSARFNEAFDK 434
           +   + ++++D+++      +D         YW               Y +   +   + 
Sbjct: 419 VKRVFTDRDFDIAIEGMSNLYD-PTVGVQRLYWSKNFKPGVPFTNGSKYSNPEVDRLLET 477

Query: 435 ARNAARPADRLRYLGDAQRLLAEDAANVFLFQPQFITIAGRNLRGL 480
           A     P  RL    + Q+L+ ED   + +  P  IT+  + ++ L
Sbjct: 478 AAVEIDPKKRLELFNEFQKLVVEDLPTLDIVTPAVITVYDKRVKNL 523