Pairwise Alignments

Query, 497 a.a., ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 521 a.a., peptide ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

 Score =  171 bits (432), Expect = 7e-47
 Identities = 155/525 (29%), Positives = 245/525 (46%), Gaps = 64/525 (12%)

Query: 8   LATGAAALTPLALPTIALAQRKKDALVIGLTLEPTGLDP-TAKAGAEIAEVVLYTVFETL 66
           LA   AA  P A      AQ   D LV+G   EP  LDP T  A  +    +L  V++ L
Sbjct: 14  LAFAGAAAAPAA------AQTPPDVLVVGQIAEPQSLDPHTVTATNDFR--ILVNVYDGL 65

Query: 67  TKINSDGG--VTPLLAESWEVSPDLKTYTFKLRRGVKFQNGEPFNAQSVKFSFDRAAAAN 124
            +   DG   V P LAESW++S D KTYTF LR+GVKF +G  F+A++VKF+FDR    +
Sbjct: 66  VRFK-DGTLEVEPALAESWKISDDGKTYTFTLRQGVKFHDGSNFDAEAVKFNFDRMLKKD 124

Query: 125 STNKDKRTF-------TNIATQVVDEHTVVLINKEIEPDLLFLLGQASAILVEPKSVETN 177
               D   F       +  A  V+DEHTV     E     L  L   + ++V P +VE +
Sbjct: 125 HPFYDTGPFPLSFNFASVKAVNVLDEHTVEFKLSEAFAPFLSNLAYPTGLIVSPVAVEKH 184

Query: 178 ATK----PVGTGPYRLDNWAKGSSIVLAK-WDGWRGADTVQIRKATFRFISEPAAQTAAL 232
             +    P GTGP++   W     +V+ +  D W  A   +++   FR I++   + A +
Sbjct: 185 GKEYGRSPSGTGPFKFVEWLSNQRVVVERNPDYWDSA--AKLQAVVFRPITDANTRVAEM 242

Query: 233 LSNDIDLFPHASVSRSLSQFQNDKRFQIVFNASLGKTILAINNKRKPLDDVRVRRAISAA 292
           ++  ID+        +L+ F+ D  F +   A        +N K+ P  D RVR+A + A
Sbjct: 243 MAGGIDVMVEVPPD-NLATFEQDANFAVAEQAGPHVWFTILNTKQGPFADKRVRQAANYA 301

Query: 293 IDRKAVIDAAVDGRGVPIGSHYVPGLPGYVDTTGVNPY--NIEKAKKLLAEAGVKTPLEL 350
           ++++ ++D  + G    + +  +P    +V+++ V PY  + EKAK LLAEAGV+ P   
Sbjct: 302 VNKQTLVDDVLRGTAT-VAAGPIPPAFNWVESS-VEPYAHDPEKAKALLAEAGVENP--- 356

Query: 351 ELVLPPPPYARQGGE----------LIAAQLAKIGIVAKIQNVEWAQWIS----GTYGNK 396
                   Y  +GG            I A L  +G   KI+  EW  ++     G  G  
Sbjct: 357 ----QVTFYVTEGGSGMLDPITMGAAIQADLQAVGFKVKIETYEWNTFLGRVNPGLEGKA 412

Query: 397 NYDLSLILHVEPFDLVNY---------TKPEYYWGYQS-ARFNEAFDKARNAARPADRLR 446
           +      +  +P D V Y          K  +  GY S  + +E  +KAR +   A+R +
Sbjct: 413 DMAEMAWMTNDP-DTVPYLTLRTDAMPDKGGFNSGYYSNPQLDELLEKARRSTDQAERGK 471

Query: 447 YLGDAQRLLAEDAANVFLFQPQFITIAGRNLRGLWKDAPIFVNDI 491
             G+ Q ++ +DA  +F+   +   +    ++G +K  P F+ D+
Sbjct: 472 LYGEVQSIVHDDAPWLFVANWKQNAVTTAAVKG-FKLQPSFLLDL 515