Pairwise Alignments

Query, 309 a.a., Protein QmcA (possibly involved in integral membrane quality control) from Variovorax sp. SCN45

Subject, 268 a.a., hypothetical protein from Methanococcus maripaludis S2

 Score =  158 bits (400), Expect = 1e-43
 Identities = 88/218 (40%), Positives = 132/218 (60%), Gaps = 1/218 (0%)

Query: 1   MEFSVPLIILVIAIIFISQSVKFVPQQNAWVRERLGKYHGTMTPGPNFLIPFIDRVAYKH 60
           M F + L++ +  ++ I +SV  V Q    +  RLGK  G + PG NF+IPFID V  K 
Sbjct: 1   MSFWLNLLLGIFLLVLIIKSVIIVNQFELGLIFRLGKVRGRLNPGVNFIIPFID-VPIKV 59

Query: 61  SLKEIPLDVPSQICITRDNTQLQVDGILYFQVTDPMRASYGSSNYIVAVTQLAQTSLRSV 120
            ++   +DVP Q  ITRDN  +++D ++Y++V D  RA     N+  A+  LAQTSLR++
Sbjct: 60  DVRTKVIDVPPQEMITRDNAGVRIDAVIYYRVMDVNRAILEVQNFQYAIINLAQTSLRAI 119

Query: 121 IGKLELDKTFEERDVINAQVVAAIDEAALNWGVKVLRYEIKDLTPPKEILLAMQAQITAE 180
           IG LELD    +R+ IN+Q++  +D     WGVKV + E++++ PP +I  AM  Q+ AE
Sbjct: 120 IGSLELDDALNKREFINSQLLETLDRDTDAWGVKVEKVELREIEPPTDIKNAMTQQMKAE 179

Query: 181 RGKRALIAASEGRRQEQINIATGEREAFIARSEGEKQA 218
           R KRA I  +EG +Q +I  A G  E+    +EG+ +A
Sbjct: 180 RLKRAAILEAEGEKQSKILKAQGTAESMKIEAEGQAKA 217