Pairwise Alignments

Query, 495 a.a., ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 491 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

 Score =  163 bits (412), Expect = 1e-44
 Identities = 147/461 (31%), Positives = 223/461 (48%), Gaps = 32/461 (6%)

Query: 2   LNRRTLLTTAGATVALATPLAGMAQGRKDAIVIGMALEPPGLDPTSGAAAAIAEVVQYNI 61
           +N R L   AG  V  A+     AQ    +I + +  EP  LDP         +V   NI
Sbjct: 1   MNTRILGLAAGLAVLFAS--TSWAQ----SITVAIGSEPSTLDPQLRDDGGERQVND-NI 53

Query: 62  LETLTKINADGSVTPLLADSWEVSPDLKTYTFKLKRGVKYQNGEPFNAAAVKFSFDRAGS 121
            E L    A G + P LA       D +T+ FKL+ G+K+ NGEPFNA AV  S  R   
Sbjct: 54  YEALMARTATGDLVPGLAADAPTQVDARTWQFKLREGIKFHNGEPFNADAVVASVLRVID 113

Query: 122 EKSTNKDKRTFANLS-TQVVDDYTVVVINKEIDPDLPFVLGQATAV-IVEPKSAEGNATK 179
             + ++       LS  + VDD  V +I    DP LP  +     V     K+A   A K
Sbjct: 114 PANNSEQMAYLGPLSGAEKVDDLAVRIITSAPDPILPARMYWLKMVPAAYSKNATAIAEK 173

Query: 180 PVGTGPYKLDNWAKGSSITLSK----WEGFRSPATAKINKVTFRFISDTAAQAAAVLSGD 235
           PVGTGPYK   W +G+SIT++     W G       +I+ VT+RF+S+   + + +++G+
Sbjct: 174 PVGTGPYKFGTWDRGNSITMTANTDYWGG-----EPQIDDVTYRFVSEAGTRLSGLVAGE 228

Query: 236 IDVFPRIGTRVVPQFKMN-PQFQVILAGSRAKTILSINNRKKPLDDVRVRRAILAAIDRK 294
            DV       ++P+F  + PQ + +     +  IL ++N    + DVRVRRA+  AIDR 
Sbjct: 229 FDVV----VNLLPEFADSVPQAKSVSGLETSVIILGVDN--PAVKDVRVRRALNMAIDRH 282

Query: 295 AVIEGA-ADGFGVPIGSHYVPGAAGYVDTTGINPFDIEKAKKLLAEAGVK-TPLELKMTL 352
           A+ E   A    V  G   +PGA GY ++    P+D + AKKL+AEAG   T ++L    
Sbjct: 283 ALAESLFAGNAKVTTGQLVLPGAFGYNESLENWPYDPQGAKKLIAEAGAAGTTIDLVGEA 342

Query: 353 PPPPYARQGGEVIVAELAKIGIVVKVQNVEWAQWLSGTY--GNKDYDLSIVSHVEPFDLG 410
                 R+  E + A   ++G+ V V+ +E++ +L   +  GN+     +++  E FD  
Sbjct: 343 GRWLKDRELIEAVAAYWTEVGLKVNVEILEFSVYLDRIFDMGNRPDSYFVLNSNELFDAD 402

Query: 411 NYAKSDYYWGYQSKAFDTLFDKIKTTANTAERNKLLGDAQK 451
                 Y  G Q  A ++  DK    A  A R+++ G+ +K
Sbjct: 403 REMAFAYEPG-QGGASNS--DKALGEAIRAARSEVDGEKRK 440