Pairwise Alignments

Query, 495 a.a., ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 501 a.a., ABC transporter oligopeptide-binding protein from Sinorhizobium meliloti 1021

 Score =  164 bits (415), Expect = 7e-45
 Identities = 129/397 (32%), Positives = 199/397 (50%), Gaps = 28/397 (7%)

Query: 1   MLNRRTLLTTA---GATVALATPLAGMAQGRKDAIVIGMALEPPGLDPTSGAAAAIAEVV 57
           M  +RTL+  A   G+ +A A   +G        + I +  E   L+P     + I  ++
Sbjct: 1   MQMKRTLIMGALMLGSALAPAFAASG-------PVKIVLPEEADLLEPCMATRSNIGRII 53

Query: 58  QYNILETLTKINA--DGSVTPLLADSWEVSPDLKTYTFKLKRGVKYQNGEPFNAAAVKFS 115
             N+ ETLT+++      + P LA+SWE   D  ++ F L+ GVK+ +G  FNA  VK+S
Sbjct: 54  MQNVSETLTELDVREGKGLMPRLAESWEQKED-GSWRFNLRTGVKFSDGTDFNAKDVKYS 112

Query: 116 FDRAGSEKSTNKDKRTFA--NLSTQVVDDYTVVVINKEIDPDLPFVLGQATAVIVEPKSA 173
           FDR  S+K+  + +R F   N+   VVDD TV      + P LP +L   T  IV  ++ 
Sbjct: 113 FDRVMSDKNACESRRYFGGMNIKIDVVDDTTVDFTVDPVQPILPLLLSLLT--IVPEETP 170

Query: 174 EGNATKPVGTGPYKLDNWAKGSSITLSKWEGFRSPATAKINKVTFRFISDTAAQAAAVLS 233
                +PVGTGPYKL +W  G  I LS  + +      ++ + T+ F +D A +AA V +
Sbjct: 171 MEFVREPVGTGPYKLTDWTPGQQIVLSARDDYWG-EKPEVTEATYLFRADPAVRAAMVQT 229

Query: 234 GDIDVFPRIGTRVVPQFKMNPQFQVILAGSRAKTILSINNRKKPLDDVRVRRAILAAIDR 293
           G+ D+ P I          NP        S     L I++  +PL+DVR+RRA+  AIDR
Sbjct: 230 GEADLSPSISQTEA----TNPATDFSYLDSET-VYLRIDHNIEPLNDVRIRRALNLAIDR 284

Query: 294 KAVIEGAADGFGVPIGSHYVPGAAGYVDTTGINPFDIEKAKKLLAEA---GVK--TPLEL 348
           +A +        V   +   P   G+     + P+D E+AKKL+ EA   GVK  TP+ +
Sbjct: 285 EAFLGTLVPDSAVLATAIVPPPTLGWNPDVKVFPYDPEQAKKLIEEAKADGVKVDTPITI 344

Query: 349 KMTLPPPPYARQGGEVIVAELAKIGIVVKVQNVEWAQ 385
                  P   +  E I A+L ++G+ V+++ VE A+
Sbjct: 345 IARTANFPNVTEIMEAIQAQLQEVGLKVELKFVEVAE 381