Pairwise Alignments

Query, 396 a.a., Beta-lactamase class C-like and penicillin binding proteins (PBPs) superfamily from Variovorax sp. SCN45

Subject, 450 a.a., beta-lactamase (RefSeq) from Shewanella loihica PV-4

 Score = 91.7 bits (226), Expect = 4e-23
 Identities = 98/357 (27%), Positives = 161/357 (45%), Gaps = 51/357 (14%)

Query: 75  IPERLQP----LAKTVPWKGNNTDIVSVLQETRTNAFLVMCRGTLVNEWYSEPGKKTAR- 129
           +PE++ P    L  T P K   T +      +  +  LV+ +G +V E Y     KT R 
Sbjct: 103 LPEKIDPKIGQLTFTRPGKALET-VAQHFDNSNMDGLLVLHKGNVVYESY-----KTMRP 156

Query: 130 --ESSW-SIAKSVVGLLVGQLVAEGKLSEDTKLVAVLPEFAAGGKFDEITVRDLLDMKSG 186
             +  W S +K + G +V  L  EGK+     +   +PE    G +D++TV + LDM +G
Sbjct: 157 FDKHQWFSCSKVIPGTMVELLALEGKIDIKKPVSTYVPELKGSG-WDQVTVEETLDMATG 215

Query: 187 IDVTE-----DYSEYKPFTGVAGMQVTSDL----------PRYMMRNRALAFAPGTRSDY 231
           +D TE     D +   P  G     V+  L          P  ++RN        T  +Y
Sbjct: 216 LDSTEHEEPNDDARVNPIRGWYKWAVSLGLFEDKQNLNQSPFDVLRNMKKIKPGHTVFEY 275

Query: 232 RSIDAQYLSMIVARLEGEPLAKVLERRLWQPLGAQDEASWNLDHANGLERGFGNLNATPR 291
            SI+   L +IV ++ G+ L +V   R+W+ +GAQ++A   +    GL  G+G +N T R
Sbjct: 276 NSINTFVLELIVNQVTGKTLNEVFGDRVWRKIGAQNDAFVGVT-KYGLGNGWGFVNTTLR 334

Query: 292 DFAKLGLLALAGGKPGERALISPEWMTRITTPVAEAEP-----GWMYAALWWHPPGHE-- 344
           D  + G++         +  I P+  + IT+   + +P     G++   L    P  +  
Sbjct: 335 DMGRFGMIFTPSWNKISKEQIIPD--SLITSIQKDGKPEIYLKGFVGKELQKSFPDIKGL 392

Query: 345 KNR----------DYSAIGVYGQYVYVNPGRHTVVVKLSDYGSQQDEAETIDVFRAV 391
            NR          D+   GV GQ +Y++P   TVVV  S  G QQ+E    ++ +++
Sbjct: 393 SNRYQWDIVFPDGDFYKGGVGGQGLYISPSNDTVVVWFST-GKQQEEILAREIVKSL 448