Pairwise Alignments

Query, 300 a.a., Transcriptional regulator, LysR family from Variovorax sp. SCN45

Subject, 303 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  169 bits (427), Expect = 9e-47
 Identities = 101/295 (34%), Positives = 158/295 (53%), Gaps = 2/295 (0%)

Query: 2   DLNELALFLQVARLGSFALAGKALGVPASTVSRQVKNIEQQLGVRLMQRSTRRLVLTEAG 61
           DLN + LF  V R   F+ A +  G P ST+SR++  +E++LGVRL+QR TR L LT+ G
Sbjct: 3   DLNGMMLFAAVVRAKGFSQAARETGHPKSTISRKIAQLEEELGVRLLQRDTRNLSLTQVG 62

Query: 62  RLLVQRCETHFSAIGDVTREVLDGVGVVSGTLRIATPSDFFDWFPLSWLGEFRAMHPKVR 121
            L  Q C++  + +      +      VSG+LRIA P  F      +    F  ++P V 
Sbjct: 63  ALFYQHCDSIRNEVEAAKAVIESTHDDVSGSLRIAIPVSFSQELIANLCSGFMRLYPNVE 122

Query: 122 LEIFAQDALVDVIGDGIDIAFRAGKLESSRLVAILLTTTSVFLVASAGYLSLRGTPRNPE 181
           L++   D  + ++G+G DIA + G L+SS LVA LL      LVAS GYL  RGTP  P+
Sbjct: 123 LDVQFTDNDIGLVGEGYDIAIKYGPLQSSDLVARLLFERQPILVASPGYLKTRGTPATPK 182

Query: 182 DLASHDGLTLRSSPSQSQRDWRVVGPAGEVRLEVQSRFSASAMGLLRDAAVEGLGIALLP 241
           +L+ H G+ L    S+S   W +     +  +  Q +   ++  +++  A++  GIA+L 
Sbjct: 183 ELSDHSGILL--GTSRSAPIWPLGKGTRKTMVSFQRKVRVNSPIMVKQLALDDFGIAMLS 240

Query: 242 EVLIRSELDAGRLQRVLPEYGQPSVSFSLLYPSRQQIQKAASAFVEFAVAKFGGK 296
               ++EL  G+L  +L E+         +Y SR+Q+    SAF++F V +F  +
Sbjct: 241 NSACKTELANGQLVPILQEWPMEPFKVYGVYSSRRQLATNISAFLDFFVKRFSSQ 295