Pairwise Alignments

Query, 244 a.a., Lactam utilization protein LamB from Variovorax sp. SCN45

Subject, 246 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

 Score =  192 bits (488), Expect = 5e-54
 Identities = 99/239 (41%), Positives = 147/239 (61%), Gaps = 6/239 (2%)

Query: 3   IDLNADLGEG-----AGSDEELLALVSSANIACGWHAGDARTMQQCVRWAMRHGVAIGAH 57
           I LN D+GE       G+DEE++  +  ANIACG+HA D   M + +  A+ H V IGAH
Sbjct: 6   IQLNCDMGESFGVWTMGADEEVMPWIDMANIACGFHASDPHVMSRTIDLALEHEVMIGAH 65

Query: 58  PSFPDRENFGRSTMHLPPDEIVANVLYQIGALAAIVKAEGGKLSHVKAHGQLYNQAAKEP 117
           PS+PD + FGR ++ +   E+   +LYQ+GAL A+ +++ G+LS+VK HG LYN    +P
Sbjct: 66  PSYPDLQGFGRRSLAMNEQEVSEIILYQVGALKALCESKNGQLSYVKPHGALYNDMMSDP 125

Query: 118 ELADALCEAVRRFDPTLKFFGLAGSR-MIDAARRAGLEPVEEVFADRGYMPDGSLVPRSQ 176
            +  A+ +AV  F+  L     A ++  +D A R  +  + E FADR Y+ +G L PRSQ
Sbjct: 126 SIFRAVVDAVSCFNLPLMVLASANNQDYLDIADRFDVPLLFEAFADRTYLANGKLTPRSQ 185

Query: 177 PGALIDSEERAIAQTLSMARDHRVTAIDGSVVPVNAQTVCLHGDGAHALAFARRIRERL 235
           P A++ SEE  + Q   +AR  +VT+ DG V+P+ A T+C+HGD  +A++   RIR  L
Sbjct: 186 PNAVLSSEEAILNQVRQIARYGKVTSSDGFVIPIEADTLCVHGDNPNAVSLIARIRAAL 244