Pairwise Alignments

Query, 215 a.a., 16S rRNA (guanine(966)-N(2))-methyltransferase (EC 2.1.1.171) from Variovorax sp. SCN45

Subject, 199 a.a., 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD from Vibrio cholerae E7946 ATCC 55056

 Score =  103 bits (256), Expect = 3e-27
 Identities = 60/147 (40%), Positives = 79/147 (53%), Gaps = 8/147 (5%)

Query: 11  RPAATKRPSKPSEVRIIGGEWKRTRLAVADKPGLRPTPDRVRETLFNWLASLAGAGGGEL 70
           +P  +++ +   +VRII G W+  +L V D  GLRPT DRV+ETLFNWLA        E+
Sbjct: 6   QPNPSQKKAPTGQVRIISGLWRGRKLPVHDAEGLRPTTDRVKETLFNWLAQ-------EV 58

Query: 71  PGWHCVDAFAGTGALGLEAASRGAANVLLCEQDAALVAQLQAAKTKLSAEAVRIERGNGL 130
           P   C+D FAG+G LG E ASR A  V + E +     QL+     L AE + +   + L
Sbjct: 59  PNARCLDLFAGSGGLGFECASRQANQVTMLELNPLAFQQLKTNVQSLKAENIELIHTDAL 118

Query: 131 TALERTPAGSLDAVFLDPPFDSTALYE 157
             L R      D VF+DPPF    L E
Sbjct: 119 AFL-RQSGKPYDVVFIDPPFRQGLLQE 144