Pairwise Alignments

Query, 280 a.a., DNA ligase (ATP) (EC 6.5.1.1) from Variovorax sp. SCN45

Subject, 282 a.a., DNA ligase from Vibrio cholerae E7946 ATCC 55056

 Score =  214 bits (545), Expect = 2e-60
 Identities = 115/282 (40%), Positives = 161/282 (57%), Gaps = 5/282 (1%)

Query: 1   MLTRRSLLLAGFGWAVAHAAAARDGAPSLM---LADVYRPGMSLEDQWVSEKYDGVRGYW 57
           ML R +L  A     +A    A DG  + +    A+ Y+ G+ + D W SEK DG+R  W
Sbjct: 1   MLIRLTLTAAAI--MLAQQTLANDGPLAFIPITYANNYQHGIDIFDYWKSEKLDGIRAIW 58

Query: 58  DGKQLWTRGGERIAAPAWFTAPLPRQPMDGELWVGRGRFARTVSTVRSKTPNDIAWREMH 117
            GKQL TR G  IAAPAWFT  LP   ++GELW GRG F+    TV    P D AWR++ 
Sbjct: 59  TGKQLVTRNGNPIAAPAWFTESLPSYSLEGELWAGRGNFSLVQQTVLDSQPADSAWRKIS 118

Query: 118 FMVFDLPTQGGDFTTRLSKLRKLLPITDAPWVVAVPQERATTHAELQALLDKTVKMGGEG 177
            M+FD+P   GD++ R   L  L+   D   +  V      + AEL + LD   +  GEG
Sbjct: 119 LMLFDMPDAAGDYSKRYYNLIHLVNSLDLKHIRYVEHTPIKSEAELLSYLDNISEKSGEG 178

Query: 178 LMLHRGASLYRGERNSDLLKFKPYDDAEARVVEHIMTKSRRGPRLAALLVETPEGQRFKL 237
           +ML + ++ Y+  R++DLLK K + DAEA V+ + +   +   ++ ++LV T EG  F +
Sbjct: 179 VMLRKISARYQAGRSNDLLKLKRHQDAEATVIGYRLGMGKYKGKMGSMLVRTAEGLEFYI 238

Query: 238 GTGLTDAERENPPPIGSWVTYRFDGTTANGLPKLARFARVHE 279
           G+G +D ER  PP IGS +TYR++G T  G P+ ARF RV E
Sbjct: 239 GSGFSDVERAEPPKIGSVITYRYNGLTTEGKPRFARFVRVRE 280