Pairwise Alignments

Query, 284 a.a., Cytochrome oxidase biogenesis protein Surf1, facilitates heme A insertion from Variovorax sp. SCN45

Subject, 251 a.a., hypothetical protein (RefSeq) from Shewanella loihica PV-4

 Score = 69.3 bits (168), Expect = 8e-17
 Identities = 65/263 (24%), Positives = 106/263 (40%), Gaps = 43/263 (16%)

Query: 13  RPGRFWLITVAAVLTLAATVSLGRWQLSRAAQKEALQASIEAQKVKPPLTQAEFLALAQP 72
           R G  +L+ V  +L     V LG WQL RAA+K+ALQ ++  ++   PL     LALA+ 
Sbjct: 7   RGGTIFLVLVT-LLVFTILVKLGLWQLDRAAEKQALQQALTVKQAAAPLDYQGLLALAES 65

Query: 73  SDELHRPVRLRGLWLTPQTVYLDNRQMHGVPGFYVLTPFAL----EGTEQTVMVQRGWVQ 128
                  + ++   +    + LDN+   G  G+       +    E  +  ++V+ G++ 
Sbjct: 66  ESLTGYRLEVQATPVDAPIILLDNQVYEGHVGYLAYQVMRVETESEADDPLLLVELGFID 125

Query: 129 RNFVDRTKLGAVETPAGIVEVTGLI-----EPPPSHLLELGTSVPAPAAPAGAPATAATP 183
              +DR KL  +   +  V ++G +      P   HLL                      
Sbjct: 126 SG-LDRQKLPQLTKLSREVTLSGRVYQRASNPLSQHLL---------------------- 162

Query: 184 EAAAPAPAVEGYSPIR-QNLDLEAFRAETKMPLRTDVSLQQTGPASEGLQRDWPAPALGL 242
                    E  SP+R QNL+L        +PL   +   +  P S  L   W    +  
Sbjct: 163 --------AETGSPMRIQNLNLPELSQTLGLPLAPAILQPEAIPGS-ALPHPWQPIPMSA 213

Query: 243 ERHYGYAFQWFGLSALVVILYVW 265
            +H GYA QWF ++   +IL  +
Sbjct: 214 LKHQGYALQWFSMATAFLILMAY 236