Pairwise Alignments

Query, 546 a.a., Cytochrome c oxidase polypeptide I (EC 1.9.3.1) from Variovorax sp. SCN45

Subject, 477 a.a., cytochrome-c oxidase, cbb3-type subunit I from Vibrio cholerae E7946 ATCC 55056

 Score = 64.3 bits (155), Expect = 1e-14
 Identities = 82/447 (18%), Positives = 176/447 (39%), Gaps = 60/447 (13%)

Query: 55  MVGGVLALLIRAELFQPGLQLVNPEL-FNQFTTMHGLIMVFGAIMPAFVGFANWMIPLQV 113
           +VG  + +LI A+L  P L    P L +++   +H   ++F     A    + +++  + 
Sbjct: 30  IVGMAVGVLIAAQLVWPQLNFDTPWLTYSRLRPLHTNAVIFAFGTSALFATSYYVVQ-RT 88

Query: 114 GASDMAFARMNNFSFW----LLIPAALMLVGSFFMPGGAPAAGWTLYAPLTLQMGPSMDA 169
             + +    +  F+FW    +++ AA+ L   +          W +            D 
Sbjct: 89  CQTRLFGGPLVPFTFWGWQAIIVSAAITLPLGYTSGKEYAELEWPI------------DI 136

Query: 170 GIFAMHIMGASSIMGSINIIVTILNMRAPGMTLMKMPMFCWTWLITAYLLIAVMPVLAGA 229
            I A+ +  A    G++             +      ++   W   A+++   +  +  +
Sbjct: 137 AIAAVWVAYAVVFFGTL-------------VKRKTSHIYVANWFFGAFIITVAVLHIVNS 183

Query: 230 ITMTLTDRHFGTSFFNPAGGGDPVMYQHIFWFFGHPEVYIMILPAF-GIISQVVPAFARK 288
           + + ++    G S+   AG  D ++     W++GH  V  ++   F G++   VP  A +
Sbjct: 184 MALPVS---MGKSYSIYAGAVDAMVQ----WWYGHNAVGFLLTAGFLGMMYYFVPKQAER 236

Query: 289 KLFGYASMVYATSSIAILSFIVWA--HHMFTTGMPLTGQLFFMYATMLIAVPTAVKIFNW 346
            ++ Y   +      A++S  +WA  HH+  T +P   Q   M  ++++  P+   + N 
Sbjct: 237 PVYSYRLSI--VHFWALISLYIWAGPHHLHYTALPDWTQSLGMVMSLVLFAPSWGGMING 294

Query: 347 IATM---WQGSMTFETPMLFAVGFIFVFTMGGFTGLILAVAPIDTQLQDTYYVVAHFHYV 403
           I T+   W   + ++  + F +  +  + M  F G ++++  ++     T + + H H  
Sbjct: 295 IMTLSGAWH-KLRYDPILRFLIVSLSFYGMSTFEGPMMSIKTVNALSHYTDWTIGHVHSG 353

Query: 404 LVAGSLFAMFSGFYYWVPKWTGV--MYNETRGKVHFWWSLISFNVTFFPMHFLGLAGMPR 461
            +           Y+ +P+  G   MY+ +    HFW + I   +    M   G+     
Sbjct: 354 ALGWVAMVSIGSVYHLIPRLFGQERMYSVSLINAHFWLATIGTVLYIVAMWISGV----- 408

Query: 462 RYADYPMQFADFNAVASVGAFFFGFAQ 488
                 MQ   + AV S G   + F +
Sbjct: 409 ------MQGLMWRAVNSDGTLTYSFVE 429