Pairwise Alignments

Query, 546 a.a., Cytochrome c oxidase polypeptide I (EC 1.9.3.1) from Variovorax sp. SCN45

Subject, 551 a.a., cbb3-type cytochrome c oxidase subunit I from Sinorhizobium meliloti 1021

 Score = 61.6 bits (148), Expect = 7e-14
 Identities = 56/253 (22%), Positives = 107/253 (42%), Gaps = 16/253 (6%)

Query: 212 WLITAYLLIAVMPVLAGAITMTLTDRHFGTSFFNPAGGGDPVMYQHIFWFFGHPEVYIMI 271
           W   A++++  +  +   +T+ ++  H   S+   +G  D ++     W++GH  V   +
Sbjct: 223 WYYMAFIVVVAILHIINNLTVPVSLGH-AKSYTIWSGVQDSMVQ----WWYGHNAVAFFL 277

Query: 272 LPAF-GIISQVVPAFARKKLFGYASMVYATSSIAILSFIVWA--HHMFTTGMPLTGQLFF 328
              F  ++   +P  A + +F Y   + +   I    F +WA  HH+  T +P   Q   
Sbjct: 278 TAGFLAMLYYYLPKRAERPIFSYRLSILSFWGITF--FYMWAGSHHLHYTALPHWVQNLG 335

Query: 329 MYATMLIAVPTAVKIFNWIATM---WQGSMTFETPMLFAVGFIFVFTMGGFTGLILAVAP 385
           M  ++++ VP+     N + T+   W   +  +  + F +   F + +  F G  LAV P
Sbjct: 336 MTFSVMLLVPSWASAGNALLTLNGAWH-KVRDDATLRFIMMAAFFYGLSTFEGSFLAVRP 394

Query: 386 IDTQLQDTYYVVAHFHYVLVAGSLFAMFSGFYYWVPK-WTGV-MYNETRGKVHFWWSLIS 443
           +++    T + V H H   +       +   Y  VP  W    MY+    +VHFW +   
Sbjct: 395 VNSLSHYTDWTVGHVHAGALGWVALITYGSLYTLVPAIWKRERMYSAALVEVHFWLAFAG 454

Query: 444 FNVTFFPMHFLGL 456
             +  F M   G+
Sbjct: 455 TVIYVFAMWNSGI 467