Pairwise Alignments

Query, 546 a.a., Cytochrome c oxidase polypeptide I (EC 1.9.3.1) from Variovorax sp. SCN45

Subject, 669 a.a., cytochrome o ubiquinol oxidase subunit I from Sinorhizobium meliloti 1021

 Score =  415 bits (1066), Expect = e-120
 Identities = 213/520 (40%), Positives = 309/520 (59%), Gaps = 18/520 (3%)

Query: 28  TGWRRWVFATNHKDIGTLYLLFSFTMLMVGGVLALLIR---AELFQPGLQLVNPELFNQF 84
           T WR W+ + +HK IG +Y++ +  ML+ G   A+++R   A  F      + P  ++Q 
Sbjct: 53  TLWRDWLTSVDHKKIGIMYIILALVMLLRGFSDAIMMRLQQAMAFGGSEGYLPPHHYDQV 112

Query: 85  TTMHGLIMVFGAIMPAFVGFANWMIPLQVGASDMAFARMNNFSFWLLIPAALMLVGSFFM 144
            T HG+IM+F   MP   G  N+++PLQ+GA D++F  +NNFSFW+    A++++ S F+
Sbjct: 113 FTAHGVIMIFFMAMPFVTGLMNFVVPLQIGARDVSFPFLNNFSFWMTTAGAIIIMLSLFV 172

Query: 145 PGGAPAAGWTLYAPLT---LQMGPSMDAGIFAMHIMGASSIMGSINIIVTILNMRAPGMT 201
            G     GW  Y PL+      G  +D  ++ + I G  + +  IN+I TI+ MRAPGMT
Sbjct: 173 -GEFARTGWLAYPPLSGADYSPGVGVDYYVWGLQIAGIGTTLSGINLIATIVKMRAPGMT 231

Query: 202 LMKMPMFCWTWLITAYLLIAVMPVLAGAITMTLTDRHFGTSFFNPAGGGDPVMYQHIFWF 261
           +MKMP+F WT L T  L++A  PVL   + +   DR+ GT+FF    GG+P+MY ++ W 
Sbjct: 232 MMKMPVFTWTSLCTNVLIVATFPVLTATLALLTLDRYAGTNFFTNDLGGNPMMYVNLIWI 291

Query: 262 FGHPEVYIMILPAFGIISQVVPAFARKKLFGYASMVYATSSIAILSFIVWAHHMFTTGMP 321
           +GHPEVYI+ILPAFGI S+VV  F  K+LFGYASMVYAT  I ILS+IVW HH FT G  
Sbjct: 292 WGHPEVYILILPAFGIFSEVVATFCGKRLFGYASMVYATVVITILSYIVWLHHFFTMGSG 351

Query: 322 LTGQLFFMYATMLIAVPTAVKIFNWIATMWQGSMTFETPMLFAVGFIFVFTMGGFTGLIL 381
            +   FF   TM+I++PT  K+FNW+ TM++G + +E PML+ +GF+  F +GG TG++L
Sbjct: 352 ASVNAFFGITTMIISIPTGAKMFNWLFTMYRGRIRYEVPMLWTIGFMVTFVLGGMTGVLL 411

Query: 382 AVAPIDTQLQDTYYVVAHFHYVLVAGSLFAMFSGFYYWVPKWTGVMYNETRGKVHFWWSL 441
           AV P D  L ++ +++AHFH V++ G +F + +G  YW PK  G   +   GK+ FW+ L
Sbjct: 412 AVPPADFVLHNSLFLIAHFHNVIIGGVVFGLMAGVVYWFPKAFGFRLDPFWGKMSFWFWL 471

Query: 442 ISFNVTFFPMHFLGLAGMPRRYADYPMQFAD-----FNAVASVGAFFFGFAQVYFFL-FV 495
             F   F P++ LGL G+ RR +    QF D     +  +A+ GAF      +   +  V
Sbjct: 472 TGFYFAFMPLYVLGLMGVTRRVS----QFEDPSLQIWFVIAAFGAFLIALGILSMLIQLV 527

Query: 496 VFPTMRGKGEKAAQKPWEGAEGLEWEVPSPAPFHTFENPP 535
           V    R +       PW+G   LEW   SP P + F   P
Sbjct: 528 VSFVRREELRDTTGDPWDG-RTLEWSTASPPPDYNFAFTP 566