Pairwise Alignments

Query, 604 a.a., ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 491 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

 Score = 82.4 bits (202), Expect = 4e-20
 Identities = 79/294 (26%), Positives = 117/294 (39%), Gaps = 48/294 (16%)

Query: 71  GSAPAYLDSLLFD---------TLLTGSMDETASGYGL--LAEDVTVAPDRRSVTFRLRP 119
           GS P+ LD  L D          +    M  TA+G  +  LA D     D R+  F+LR 
Sbjct: 30  GSEPSTLDPQLRDDGGERQVNDNIYEALMARTATGDLVPGLAADAPTQVDARTWQFKLRE 89

Query: 120 EARFHNGMPVEAADVKHSYDTLIGPYTSPGYKTLLQEVDGADVIDARTIRFRFKTPNREL 179
             +FHNG P  A  V  S   +I P  +      L  + GA+ +D   +R     P+  L
Sbjct: 90  GIKFHNGEPFNADAVVASVLRVIDPANNSEQMAYLGPLSGAEKVDDLAVRIITSAPDPIL 149

Query: 180 PLIVGSLPIFSRAWGVENGKAKPFDQVVMDIPIGSGAYKIGPVRFGKDITYVRDPGYWAR 239
           P  +  L +   A+  +N  A      + + P+G+G YK G    G  IT   +  YW  
Sbjct: 150 PARMYWLKMVPAAYS-KNATA------IAEKPVGTGPYKFGTWDRGNSITMTANTDYWG- 201

Query: 240 DLPVNRGSHNFDRITVKIYKDNTARLEALKAGEFDMM-----SFYSAGDWARRVNGKRFN 294
                 G    D +T +   +   RL  L AGEFD++      F  +   A+ V+G   +
Sbjct: 202 ------GEPQIDDVTYRFVSEAGTRLSGLVAGEFDVVVNLLPEFADSVPQAKSVSGLETS 255

Query: 295 TGELVKREFQHKKPAGFQSFVLNSRRDKLKDPRVREALGLALDYEWMNRQMFYG 348
                               +L      +KD RVR AL +A+D   +   +F G
Sbjct: 256 V------------------IILGVDNPAVKDVRVRRALNMAIDRHALAESLFAG 291