Pairwise Alignments

Query, 604 a.a., ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 494 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

 Score = 72.0 bits (175), Expect = 5e-17
 Identities = 64/240 (26%), Positives = 97/240 (40%), Gaps = 28/240 (11%)

Query: 109 DRRSVTFRLRPEARFHNGMPVEAADVKHSYDTLIGPYTSPGYKTLLQEVDGADVIDARTI 168
           D  +  F+LR   +FHNG P  A  V  S   +I P  +         +  A+ +D  T+
Sbjct: 83  DATTWQFKLRDGVKFHNGEPFNADAVVASVSRVIDPANNSEQMAYFGTIKTAEKVDDLTV 142

Query: 169 RFRFKTPNRELPLIVGSLPIFSRAWGVENGKAKPFDQVVMDIPIGSGAYKIGPVRFGKDI 228
                 P+  LP  +  + +      +  G AK  D  +   P+G+G YK      G D+
Sbjct: 143 NLVTTGPDPILPSRMYWMKM------IAPGYAKDGD--LAGAPVGTGPYKFDSWNRGTDL 194

Query: 229 TYVRDPGYWARDLPVNRGSHNFDRITVKIYKDNTARLEALKAGEFDMMSFYSAGDWARRV 288
             V +  YW        G    D +T +   +   RL  L +GEFD+++           
Sbjct: 195 KLVANADYWG-------GEPQIDDVTYRFVTEPGTRLSGLLSGEFDVITNLL-------- 239

Query: 289 NGKRFNTGELVKREFQHKKPAGFQSFVLNSRRDKLKDPRVREALGLALDYEWMNRQMFYG 348
               F T      +F          FVL +  +  KDP+VREAL LA+D + M   +F G
Sbjct: 240 --PEFTTN---VPKFAAVPGLETSVFVLGTDNEVTKDPKVREALNLAIDRKAMAEGLFMG 294