Pairwise Alignments

Query, 617 a.a., Trans-feruloyl-CoA synthase (EC 6.2.1.34) from Variovorax sp. SCN45

Subject, 601 a.a., long-chain fatty acid--CoA ligase from Vibrio cholerae E7946 ATCC 55056

 Score = 89.0 bits (219), Expect = 5e-22
 Identities = 124/603 (20%), Positives = 237/603 (39%), Gaps = 101/603 (16%)

Query: 61  RERLADGS---------TGDWVRVSYAQALKEARGIGQALLDRGLSAERPVAILSENGIE 111
           R+R+A G           G W  +++ Q  ++   +  ALL +G+  +  +AI S N   
Sbjct: 13  RQRIAQGGDNAALKHKQNGQWQAINWHQFGEQLDELSMALLAQGIGVQDKIAIFSNNMPR 72

Query: 112 HALLALGCLYAGVPYCPVSPPYSLVSQDFEKLRHVFDTLTPGLVFASDAARFAKAIAA-- 169
             +     L       P+ P     +   E+  ++       +VF  + A+F  A++   
Sbjct: 73  WTIADFAALQIRAVTVPIYP-----TNTPEQAAYILQNADVKVVFVGEQAQFDAALSQFE 127

Query: 170 -------VVPADTEVVLAQGTLEGRPTTAFDALASTPATPAIDEAMRATGPDTITKFLFT 222
                  +V  +  + L Q +        F A +       +D  +     D +   ++T
Sbjct: 128 QCPELRLIVAMNANIDLKQASC-AMHWDEFVAQSHHQDRAPLDALIEQANYDDLFTLIYT 186

Query: 223 SGSTKMPKAVINTHRMWCANQQQLRQSIPALGDEPPVLVDWLPWNHTFGGNHNVGIVLDN 282
           SG+T  PK V+  +R   A  +   Q +    ++  V + +LP +H F       ++   
Sbjct: 187 SGTTGTPKGVMLDYRNIGAQLEGHDQRLNLTQED--VSLCFLPLSHVFERAWTAYVLYKG 244

Query: 283 GGTLYVDDGKPTPAGMAETLRNLREIAPTIYFNVPTGFEAIAHAMETDAVLRRNLLSRVK 342
               Y+ D       +A     L E+ PT+   VP  +E I  A+  + V++  L+ +V 
Sbjct: 245 ATNCYLQD-------VAHVREALAEVRPTVMCAVPRFYEKIFSAIH-EKVVKAPLVRKV- 295

Query: 343 MFFYS---GAALS-------QPVWDSLHRTQESEVGERIVMGT---------------GL 377
           +F ++   GA ++       QP W      Q  +  +++V+                 G 
Sbjct: 296 LFTWAVNMGAKMAVCRQQQRQPSW---MLKQSHQFADKLVLSKLRALLGGRINFMPCGGA 352

Query: 378 GMTESGPFALYVTGPDVKSG---------------------DVGLPAPGIELKLIEVDGK 416
            + E+     +  G +VK G                      +GL  PG ++K+ E    
Sbjct: 353 KLDETIGRFFHAIGINVKLGYGMTETTATVSCWDDHCFNPDSIGLSMPGAQVKIGE---N 409

Query: 417 TEVRYRGPNITPGYWRAPEATAEAFDEEGFFSTGDAVKWIDDADIHRGLRFDGRIAEDFK 476
            E+  RGP +  GY++  + T E+FDE+GF  TGDA       D +  L    RI E  K
Sbjct: 410 NEILVRGPMVMRGYYKLDKETTESFDEQGFLKTGDA----GHIDENGNLFITDRIKELMK 465

Query: 477 LATGTFVSVGPMRAKIIAAGSPYVQDAVLTGINLKEVGALIFP-----TQKVRQLAGLPA 531
            + G +++  P   +       +++   +     K V ALI P      +  ++L     
Sbjct: 466 TSGGKYIA--PQVIEGAIGKDHFIEQIAVIADTRKFVSALIVPCFDSLEEYAKELNIKYH 523

Query: 532 DATMRQVLESAPVQAHFQQVVDTLAAGATGSANRIARLHLMAEPPSIDKGEVTDKGSINQ 591
           D    ++++ + V   F++ V+ L         ++ +  L+ +  S+D GE+T    + +
Sbjct: 524 DRL--ELIKHSQVLEMFEKRVNELQK-ELAKFEQVKKFRLLPKAFSMDSGELTPTQKLRR 580

Query: 592 RAV 594
           + +
Sbjct: 581 KVI 583