Pairwise Alignments

Query, 346 a.a., ABC transporter, permease protein 1 (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 336 a.a., Binding-protein-dependent transport systems inner membrane component from Pseudomonas syringae pv. syringae B728a

 Score =  169 bits (427), Expect = 1e-46
 Identities = 114/363 (31%), Positives = 182/363 (50%), Gaps = 45/363 (12%)

Query: 1   VLSYVLKRLLLFIPTLLGVLLVTFLVIQFVPGGPVEQYLAEAKTAGRGGGGGGFESGGGS 60
           + S++ +R+ L IPT  G+ L+TF +I+ +PG PVE  + E +                 
Sbjct: 1   MFSFIARRVGLLIPTFFGITLLTFALIRLIPGDPVEVMMGERR----------------- 43

Query: 61  YRGNQGVDPKRLEQIKALYGFDKPPHERLWQMLGQFARFDLGKSFFQNKDVWTLILEKLP 120
                 VDP+   Q     G +KP + +    +G+ A+ DLG+S      VW+      P
Sbjct: 44  ------VDPEMHAQAMERLGLNKPLYAQYIDYIGKLAQGDLGESLRTRTSVWSEFTSLFP 97

Query: 121 VSISLGLWTFFISYGVAVPLGVAKAVRAGTRFDLISTLIVLIGYAIPGFVLGVALLVVFG 180
            ++ L L     +  + +  GV  A++ G+ FD     I L GY++P F  G+ L++ F 
Sbjct: 98  ATLELSLAALIFAGILGLLAGVIAALKRGSLFDHGVMGISLAGYSMPIFWWGLILIMFFS 157

Query: 181 GQLQWFPLRGLTSANWDD-------------LSWGARIVDYLWHITLPVTAMVLGS--FA 225
             L W P+ G     +D                     +D L H+ LP  A+VLG+   A
Sbjct: 158 VTLGWTPVSGRIDLLYDIPPVTGFMLIDTLLSDEQGSFLDALHHMILP--AIVLGTIPLA 215

Query: 226 VTAMLTKNAFLEEIRKQYVLTARAKGLGERQVLWKHVFRNALIPIIT--GLPSAFIGAFF 283
           V A +T+++ LE +R+ YV TARAKGL   +V++ H  RNALIP++T  GL    IG   
Sbjct: 216 VIARMTRSSMLEVLREDYVRTARAKGLSPARVVFVHGLRNALIPVLTVFGLQ---IGTLL 272

Query: 284 AGSLLIETLFSLDGLGLLGYESVIRRDYPVVLGTLYLFTLIGLVTKLISDLCYVWVDPRV 343
           AG++L ET+FS  G+G    E++  RDYPVV   + L   + ++   + D+ Y + +PR+
Sbjct: 273 AGAVLTETIFSWPGIGKWLIEAIGARDYPVVQNGILLIACLVILVNFVVDILYGFANPRI 332

Query: 344 KFE 346
           + +
Sbjct: 333 RHQ 335