Pairwise Alignments

Query, 346 a.a., ABC transporter, permease protein 1 (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 312 a.a., peptide ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  164 bits (414), Expect = 4e-45
 Identities = 101/341 (29%), Positives = 167/341 (48%), Gaps = 35/341 (10%)

Query: 4   YVLKRLLLFIPTLLGVLLVTFLVIQFVPGGPVEQYLAEAKTAGRGGGGGGFESGGGSYRG 63
           +VL R L F+P + G+ ++TF++++ +PG P    L    T                   
Sbjct: 6   FVLTRPLQFLPVIFGISIITFILVRLIPGDPARNLLGARAT------------------- 46

Query: 64  NQGVDPKRLEQIKALYGFDKPPHERLWQMLGQFARFDLGKSFFQNKDVWTLILEKLPVSI 123
                P  + +I+A YG D+P  ++ +  L   A  ++GKS     DV  LI  ++  +I
Sbjct: 47  -----PSAIAKIRAQYGLDEPMWQQYFYFLKNLADGEMGKSILYKIDVLKLIATRVEPTI 101

Query: 124 SLGLWTFFISYGVAVPLGVAKAVRAGTRFDLISTLIVLIGYAIPGFVLGVALLVVFGGQL 183
           +L L +  ++  +AVP+    A  +G   D I  ++   G   P F LG+ L+++F  +L
Sbjct: 102 ALVLSSVVLAVLIAVPMAALAARNSGKAPDHIVRVVSTFGIGFPPFWLGLMLMILFSVKL 161

Query: 184 QWFPLRGLTSANWDDLSWGARIVDYLWHITLPVTAMVLGSFAVTAMLTKNAFLEEIRKQY 243
              P+ G          +GA   D L H+ LP   + L    V     + A +E ++   
Sbjct: 162 DVLPVSG----------YGATFGDKLAHLILPSLTVALSLSTVLVRSLRAAMIESLKSDV 211

Query: 244 VLTARAKGLGERQVLWKHVFRNALIPIITGLPSAFIGAFFAGSLLIETLFSLDGLGLLGY 303
              ARA+G+ ER V W+HV  N+L+P I  L +  IG    G++++E++F+L G+G L  
Sbjct: 212 ATAARARGMPERIVFWRHVVPNSLVPTI-NLLAVNIGWLIGGTVVVESVFALPGMGQLLV 270

Query: 304 ESVIRRDYPVVLGTLYLFTLIGLVTKLISDLCYVWVDPRVK 344
            ++  RDY VV G   +F    ++   I+D+  V VDPRVK
Sbjct: 271 RAIFSRDYMVVQGVAMVFACATVLVNFIADIVTVAVDPRVK 311