Pairwise Alignments

Query, 346 a.a., ABC transporter, permease protein 1 (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 360 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  402 bits (1033), Expect = e-117
 Identities = 189/357 (52%), Positives = 263/357 (73%), Gaps = 16/357 (4%)

Query: 3   SYVLKRLLLFIPTLLGVLLVTFLVIQFVPGGPVEQYLAEAKTA-------GRGGG----G 51
           +Y+L+RLLL IPT++G++ ++F V+QF PGGPVEQ +++   A       G  G     G
Sbjct: 3   AYILRRLLLMIPTIVGIMAISFAVVQFAPGGPVEQVISDLTNAAGSDRLSGNAGDLMPVG 62

Query: 52  GGFESGGGSYRGNQGVDPKRLEQIKALYGFDKPPHERLWQMLGQFARFDLGKSFFQNKDV 111
           GG    GG YRG QG+DP  + +++  +GFDKPP ER   M+  + RFD G+SFF+N  V
Sbjct: 63  GG---DGGQYRGAQGLDPDFIAKLEKQFGFDKPPLERFVTMMWDYMRFDFGESFFRNTPV 119

Query: 112 WTLILEKLPVSISLGLWTFFISYGVAVPLGVAKAVRAGTRFDLISTLIVLIGYAIPGFVL 171
             LI++K+PVSISLG+W    SY +++PLG+ KAV  G+ FD+ ++ ++++GYA+P F+ 
Sbjct: 120 IDLIIQKMPVSISLGVWILIFSYAISIPLGIKKAVSDGSTFDVWTSGVIIVGYAVPSFLF 179

Query: 172 GVALLVVFGGQ--LQWFPLRGLTSANWDDLSWGARIVDYLWHITLPVTAMVLGSFAVTAM 229
           G+ L+V+F G     WFPLRGL S N+D LSW  +I+DY WH+TLP+  ++L +FA T +
Sbjct: 180 GILLIVLFAGGSFFDWFPLRGLVSDNFDQLSWYEKIIDYFWHMTLPLITLLLSAFATTTL 239

Query: 230 LTKNAFLEEIRKQYVLTARAKGLGERQVLWKHVFRNALIPIITGLPSAFIGAFFAGSLLI 289
           LTKN+F++EI+KQYV TARAKGL ER+VL+ HVFRNA++ II G P AFI AFF GSLLI
Sbjct: 240 LTKNSFIDEIKKQYVTTARAKGLTERRVLYGHVFRNAMLIIIAGFPGAFISAFFTGSLLI 299

Query: 290 ETLFSLDGLGLLGYESVIRRDYPVVLGTLYLFTLIGLVTKLISDLCYVWVDPRVKFE 346
           E +FSLDGLG LGY++V++RDYP+V  TL++++L+GLV  L+SDL Y WVDPR+ FE
Sbjct: 300 EYIFSLDGLGRLGYDAVVKRDYPIVFATLFIYSLMGLVVSLVSDLIYTWVDPRIDFE 356