Pairwise Alignments

Query, 346 a.a., ABC transporter, permease protein 1 (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 311 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  160 bits (405), Expect = 4e-44
 Identities = 103/346 (29%), Positives = 172/346 (49%), Gaps = 35/346 (10%)

Query: 1   VLSYVLKRLLLFIPTLLGVLLVTFLVIQFVPGGPVEQYLAEAKTAGRGGGGGGFESGGGS 60
           +L + L+R+L  IPT++ V L+ F++   VPG       A+                   
Sbjct: 1   MLRFTLRRVLQIIPTVVVVALLIFVIFSVVPGTFAASLFAD------------------- 41

Query: 61  YRGNQGVDPKRLEQIKALYGFDKPPHERLWQMLGQFARFDLGKSFFQNKDVWTLILEKLP 120
             G +  DP+ + ++   +G +KP  ER    +   A+FDLG SF   + V  LI +++ 
Sbjct: 42  --GRRAADPQMIARLNEEFGLNKPLMERFVTYVTDLAQFDLGTSFRTRQPVIDLINDRMW 99

Query: 121 VSISLGLWTFFISYGVAVPLGVAKAVRAGTRFDLISTLIVLIGYAIPGFVLGVALLVVFG 180
            S+ L +     +  ++VPLG   A+R G+  D ++ +  + G ++P F LG+ ++ +F 
Sbjct: 100 ASLQLAIAAMIFALVISVPLGFVAALRPGSVLDTVTMIGAVSGLSMPQFWLGLLMMYLFA 159

Query: 181 GQLQWFPLRGLTSANWDDLSWGARIVDYLWHITLPVTAMVLGSFAVTAMLTKNAFLEEIR 240
            QL W P  G    ++ +L              LP   + +   A+ A  T+   L+ + 
Sbjct: 160 LQLNWLPSFGYGDGSFRNL-------------ILPAVTLGVTPLALLARTTRAGVLDVLN 206

Query: 241 KQYVLTARAKGLGERQVLWKHVFRNALIPIITGLPSAFIGAFFAGSLLIETLFSLDGLGL 300
             ++ TA +KG+ E +V+  HV RNAL+ I+T +   F G+    +++IE LF+  G+G 
Sbjct: 207 ADFIRTAHSKGMSEAKVVRWHVARNALVLIVTTVGLQF-GSLIGQAVVIEKLFAWPGIGS 265

Query: 301 LGYESVIRRDYPVVLGTLYLFTLIGLVTKLISDLCYVWVDPRVKFE 346
           L  +SV  RD PVV GT+ +  L  LV     DL Y  +DPR+K E
Sbjct: 266 LLVDSVASRDIPVVQGTILVIVLWFLVINTAVDLIYAAIDPRIKQE 311