Pairwise Alignments

Query, 346 a.a., ABC transporter, permease protein 1 (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 373 a.a., ABC transporter, permease protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  365 bits (938), Expect = e-106
 Identities = 183/356 (51%), Positives = 249/356 (69%), Gaps = 13/356 (3%)

Query: 4   YVLKRLLLFIPTLLGVLLVTFLVIQFVPGGPVEQYLAEAKTAGR------GGGGGG---- 53
           Y+L+RLLL +PTLLG++ + F V+Q  PGGPVEQY+A  +  G       G G GG    
Sbjct: 14  YMLRRLLLVLPTLLGIVTINFFVVQLAPGGPVEQYIARLEGDGAAYMERIGAGDGGDMQP 73

Query: 54  -FESGGGSYRGNQGVDPKRLEQIKALYGFDKPPHERLWQMLGQFARFDLGKSFFQNKDVW 112
             + G  +Y+G  G+ P+ +E I+  YGFD+P  ER   MLG FA F  G S F+ + V 
Sbjct: 74  AADDGTAAYKGAAGLSPQAVEAIRRQYGFDRPILERYVTMLGDFALFRFGDSLFKGRSVI 133

Query: 113 TLILEKLPVSISLGLWTFFISYGVAVPLGVAKAVRAGTRFDLISTLIVLIGYAIPGFVLG 172
            L+ + +PVS+SLGLW+  + Y V++PLG+A+A+R G+RFD +S + V+  +AIP F+L 
Sbjct: 134 DLVGDAMPVSLSLGLWSTLVIYAVSIPLGMARALRRGSRFDTMSGIAVIAAHAIPAFLLA 193

Query: 173 VALLVVFGG--QLQWFPLRGLTSANWDDLSWGARIVDYLWHITLPVTAMVLGSFAVTAML 230
           V L+V+F G   LQWFPLRGL S   D L +GAR++DY  H+ LPVTAMV+G FA    L
Sbjct: 194 VLLIVLFAGGSYLQWFPLRGLVSPGHDALPFGARVLDYAHHMVLPVTAMVVGGFAGLTSL 253

Query: 231 TKNAFLEEIRKQYVLTARAKGLGERQVLWKHVFRNALIPIITGLPSAFIGAFFAGSLLIE 290
           T+NAFL+E+ K YV TA AKGL  + VLW+HVFRNA++ +I+GLP AF+  FF GSLLIE
Sbjct: 254 TRNAFLDELGKAYVETALAKGLTRKAVLWRHVFRNAMLLVISGLPGAFVRVFFTGSLLIE 313

Query: 291 TLFSLDGLGLLGYESVIRRDYPVVLGTLYLFTLIGLVTKLISDLCYVWVDPRVKFE 346
           T+FSL+GLGL+G+E+ ++RDYPV+  +LY+FTLIGL   L  D+  + VDPR+ FE
Sbjct: 314 TIFSLNGLGLMGFEAAMQRDYPVMFASLYVFTLIGLTASLAGDMLCMAVDPRIDFE 369