Pairwise Alignments

Query, 581 a.a., 3-methylmercaptopropionyl-CoA dehydrogenase (DmdC) from Variovorax sp. SCN45

Subject, 596 a.a., Acyl-CoA dehydrogenases from Pseudomonas stutzeri RCH2

 Score =  451 bits (1160), Expect = e-131
 Identities = 250/557 (44%), Positives = 330/557 (59%), Gaps = 15/557 (2%)

Query: 1   MDYQPRPEDVRFLLNAVLDAPTRLAALAPFAEVDEALQSQVLEEAGRFVGEVIAPLNRGG 60
           M+Y+    D+RF+L+ + DA      L     +D  L   VLEEA R+ G  IAPLNR  
Sbjct: 1   MEYKAPLRDMRFVLHELFDATAHCELLGN--GLDRELIDGVLEEAARYTGGEIAPLNRNS 58

Query: 61  DETGCRFAGGEVASPPGFREAYQAFVDGGWPALSAAPEDGGQGLPAVLEAVLYEWLAAAN 120
           DE G     GEV +P GF EAY+ +VD GW +++   E GGQG P ++    +E L  A+
Sbjct: 59  DEEGVTLENGEVRTPQGFVEAYRQYVDNGWASMTGPTEYGGQGFPQLVACNFHEMLMGAS 118

Query: 121 HGFTMAPGLLHGAYACLKHHGSDELKQRYLSKIATGEWLATMCLTEAHAGSDLGQVRTRA 180
             F +  GL  GA   L  HGSDELK  YL K+ +G W  TMCLTE  AG+DL  +RTRA
Sbjct: 119 LSFRIYSGLTEGAVLALYKHGSDELKNAYLEKLVSGSWSGTMCLTEPQAGTDLALLRTRA 178

Query: 181 VPQADGSVRVSGGKIFISGGEHDLTPNIVHLVLCRLPDAPDGPKGLSLALVPKLLPD--- 237
            PQADGS +VSG KIFISGGEHD++ NIVHLVL RLPDAP G KG+SL LVPK + +   
Sbjct: 179 EPQADGSYKVSGSKIFISGGEHDMSENIVHLVLARLPDAPAGVKGISLLLVPKFIANADG 238

Query: 238 --GARNAVHCERIEEKMGLHGSPTCTMRFDDATGWLVGEPGRGLAAMFVMMNSARLHVAL 295
             G RNA+ C  +E KMG+ G+ TC M FD ATGW+VG P +GLA MF MMN AR  V L
Sbjct: 239 TLGERNALSCGAVEHKMGIKGAATCVMNFDGATGWVVGAPNQGLACMFTMMNDARFQVGL 298

Query: 296 QGIGLLDAAWQKADAYAAERRQMRAPGPVPASRGGESADLIAEHPAVRRILDTQRAWIDG 355
           QG+G+ + A+Q + AYA ER Q R  G        + AD I  HP VRR+L TQ+  ++G
Sbjct: 299 QGLGIAEQAYQGSLAYARERLQSR--GLAGVQHPDKPADPIIVHPDVRRMLLTQKTLVEG 356

Query: 356 ARALAYRSALMLDVAAHDADAKARERAQRWCSFVTPVLKAACTQQAFHGASECLQVFGGH 415
           +R LA   A  LD+     +   R+ A    + + P++KA  T      AS  +QV+GGH
Sbjct: 357 SRMLAAYCARQLDLEHGHPEPSHRKAASTRAALLIPIVKAFFTDMGQEVASLGVQVYGGH 416

Query: 416 GYVREWGIEQIVRDSRVTMIYEGTNEIQAIDLLVRKVLPDGGAGMSAVLLELRDTLD--- 472
           GY+REWG+EQ++RDSR+T +YEGTN IQA+D + RK+L DGGA +SA+  E  +  D   
Sbjct: 417 GYIREWGMEQLMRDSRITQLYEGTNGIQALDYIRRKLLGDGGAELSALQAEFSEICDRQI 476

Query: 473 ---ASREADADVQRRLAQLRYLGTTVAMAAHANPALPYEVADDYLRVAMLTMLAWAWARI 529
              A  +  + VQ R+ + R L   +  A   +P     V+ D+L+ +   +LA  W + 
Sbjct: 477 DRPALHDMASKVQARIGEWRELTAEIIAATGRDPQEIGAVSVDFLQYSAYVLLAGLWLQA 536

Query: 530 EAAAPRDAARARVAAAF 546
              A     +     AF
Sbjct: 537 AGRAQDALEQGSAEEAF 553