Pairwise Alignments

Query, 581 a.a., 3-methylmercaptopropionyl-CoA dehydrogenase (DmdC) from Variovorax sp. SCN45

Subject, 568 a.a., putative acyl-CoA dehydrogenase from Phaeobacter inhibens DSM 17395

 Score =  360 bits (923), Expect = e-103
 Identities = 205/476 (43%), Positives = 285/476 (59%), Gaps = 23/476 (4%)

Query: 5   PRPEDVRFLLNAVLDAPTRLAALAPFAEVDEALQSQVLEEAGRFVGEVIAPLNRGGDETG 64
           P PE  +FLLN ++   + ++A   F+E  + + + +L EAG+F  EV+APLNRGGD   
Sbjct: 6   PVPE-YQFLLNHIVGY-SDISATDRFSEASDDVVTAILTEAGKFCDEVMAPLNRGGDLQP 63

Query: 65  CRFAGGEVASPPGFREAYQAFVDGGWPALSAAPEDGGQGLPAVLEAVLYEWLAAANHGFT 124
                G + + PG+ E +QA  +GGW  +SA+   GG GLP  L   + E ++ A     
Sbjct: 64  AHLENGVLRTSPGYAEGWQAISEGGWIGMSASEAFGGMGLPMTLTTAVNEMMSGACLSLQ 123

Query: 125 MAPGLLHGAYACLKHHGSDELKQRYLSKIATGEWLATMCLTEAHAGSDLGQVRTRAVPQA 184
           +AP +  G    L+HH SDE+K  YL K+ +GEW  TM LTE  AGSD+G + ++A P  
Sbjct: 124 LAPLMSQGQIEALEHHASDEIKSLYLPKLISGEWSGTMNLTEPQAGSDVGALSSKADPLD 183

Query: 185 DGSVRVSGGKIFISGGEHDLTPNIVHLVLCRLPDAPDGPKGLSLALVPKLLPD-----GA 239
           DG+  +SG KI+IS G++D   NI HLVL RLPDA  G KG+SL LVPK LPD     G 
Sbjct: 184 DGTYAISGQKIYISWGDNDFAGNICHLVLARLPDAAPGTKGISLFLVPKYLPDADGNPGK 243

Query: 240 RNAVHCERIEEKMGLHGSPTCTMRFDDATGWLVGEPGRGLAAMFVMMNSARLHVALQGIG 299
            N +    +E KMGLHGSPTC M++D A GW++G+PG GLAAMF MMN+ARL V  QG+G
Sbjct: 244 ANDLKVVSLEHKMGLHGSPTCVMQYDGAIGWMIGQPGGGLAAMFTMMNNARLGVGGQGVG 303

Query: 300 LLDAAWQKADAYAAERRQMRAPGPVPASRGGESADLIAEHPAVRRILDTQRAWIDGARAL 359
           +  AA+QKA AYA ER+Q           G  ++  I +H  VRR+L   +A +  ARA+
Sbjct: 304 IAGAAYQKALAYALERKQ-----------GKSASGTIVDHADVRRMLMEMKADLFAARAI 352

Query: 360 AYRSALMLDVAAHDADAKARERAQRWCSFVTPVLKAACTQQAFHGASECLQVFGGHGYVR 419
               +  +D+    A  +   RA    +F+TP+ KA  T+     +   +QV GG G++ 
Sbjct: 353 LLACSQAIDMQTATATQEWAARA----AFLTPIAKAFGTETGMRVSETGVQVHGGMGFIE 408

Query: 420 EWGIEQIVRDSRVTMIYEGTNEIQAIDLLVRKVLPDGGAGMSAVLLELRDTLDASR 475
           E G  Q  RD RVT IYEGTN IQA+DL+ RK++ DGG     ++ E+ +  + +R
Sbjct: 409 ETGAAQFYRDVRVTAIYEGTNGIQAMDLVGRKMM-DGGDMAHRLIDEIEEQAERAR 463