Pairwise Alignments

Query, 346 a.a., ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 352 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

 Score =  355 bits (911), Expect = e-102
 Identities = 176/327 (53%), Positives = 236/327 (72%), Gaps = 1/327 (0%)

Query: 15  WLRFKRNRLGFWSLVIFTVMVVLSLFAEVLSTDKPLVLRYEGRTYFPVLRDYSEKTFGGD 74
           W RFK NR GFWSL IF ++ V+SLFAE+++ DKPL+++Y+G  Y P+++ YSE  FGG+
Sbjct: 20  WARFKANRRGFWSLWIFLLLFVVSLFAELIANDKPLLIQYDGAWYMPIVQRYSETQFGGE 79

Query: 75  FETPADYLDPYIRDRITQGDNWAIYAPNPYGPKTLNYFAKAPSPAAPTADNIFGTDDRGR 134
           F+T ADY DPY+   I +     I+    +   T+N+      P+AP + N  GTDD+GR
Sbjct: 80  FDTEADYTDPYVVSLIEEKGQ-IIWPLIRFHYDTINFDITGSVPSAPDSVNWLGTDDKGR 138

Query: 135 DLLAQLIYGFRVSVLFGLALTAIGTVLGVAAGAVQGYFAGKVDLAFQRFIEIWSSMPELY 194
           D+LA++IYGFR+SVLFG  LT I +++GV  GA QGY+ G +DL  QRFIE+WS MP L+
Sbjct: 139 DVLARIIYGFRISVLFGFILTVISSLIGVLIGATQGYYGGWLDLFGQRFIEVWSGMPTLF 198

Query: 195 LLIIFSAIFAPSVALLLILLSLFGWMGLADYVRAEFLRNRQMDYVRAARALGVSNLQIMW 254
           LLII S+   P+   LL ++ LF WM L   VRAEFLR R  DYVRAA+A+GVS+++I+ 
Sbjct: 199 LLIILSSFVEPNFWWLLGIMVLFSWMSLVGVVRAEFLRCRNFDYVRAAQAMGVSDMRIIL 258

Query: 255 RHILPNSMVPVVTFLPFRMSAAILALTSLDFLGLGVPPGTPSLGELLSQGKANIDAWWIS 314
           RH+LPN+MV  +T +PF +S ++  LTSLDFLG G+P G+PSLGELL+QGKAN+ A W+ 
Sbjct: 259 RHMLPNAMVASLTMMPFILSGSVTTLTSLDFLGFGLPAGSPSLGELLAQGKANLQAPWLG 318

Query: 315 ISTFGVLVVTLMLLTFMGDALRDALDP 341
           IS F VL V L LL F+G+A+RDA DP
Sbjct: 319 ISAFVVLSVMLTLLVFIGEAVRDAFDP 345