Pairwise Alignments

Query, 488 a.a., Uncharacterized MFS-type transporter from Variovorax sp. SCN45

Subject, 492 a.a., Arabinose efflux permease from Pseudomonas stutzeri RCH2

 Score =  210 bits (534), Expect = 1e-58
 Identities = 138/453 (30%), Positives = 231/453 (50%), Gaps = 9/453 (1%)

Query: 5   LDSRKRWLALMVLCLGVLMIVLDTTIVNVALPSIRTDLGFTETSLVWVVNAYMLTFGGFL 64
           + S  RWL L +L   +L+IV+D T++ +ALPS+  +L  + T  +W+VNAY LT  G L
Sbjct: 1   MKSSLRWLVLGILSSALLLIVIDMTVIYLALPSLTYELRASATEKLWIVNAYALTVAGLL 60

Query: 65  LLGGRLGDLYGHRKLFLIGLVLFTLASLACGISNSQVLLVAARAVQGLGGAVVSAVSLSL 124
              G LGD +GH+++F+ GLV+F  ASL    S +  +L+AAR    +G A++   +L++
Sbjct: 61  PGMGALGDRFGHKRMFISGLVVFGWASLGAAFSPTPEILIAARVALAVGAAMMMPATLAI 120

Query: 125 IMNLFTEPAERAKAMGVYGFVCAGGGSIGVLLGGLLTSTLSWHWIFLVNLPIGVAVYALC 184
           I ++F +  ERA A G++  + +GG + G ++GG+L     W  +F++N+PI +    L 
Sbjct: 121 IRHVFEDTRERALAFGIWAAIASGGAAFGPVVGGVLLEHFWWGSVFIINVPIVLLALVLA 180

Query: 185 VALLPSARGHAHGEKLDVAGAVTVTLSLMLAVYGVVNGNEAGWGSTQTVGLLGAAVVLLA 244
           V  +PS  G+      D+  ++ V  +L+     +    +A     Q       AVV   
Sbjct: 181 VIWVPSRPGNPQ-RPFDLLASLWVMGALVGLTLAIKEAGKADPSLLQASVAACTAVVCAL 239

Query: 245 VFIAIEARVQHPLMPLGLFRLRSVSVANVVGVLWAAAMFAWFFISALYMQLVLQYTPMQI 304
            F+  + +   P++   LFR RS S   +   + +AA+     + +  +QLV+  +P+Q 
Sbjct: 240 AFLRRQRQTAVPMIDFTLFRDRSFSAGVITASVASAALMGMELVVSQRLQLVVGLSPLQA 299

Query: 305 GLAFLPANIIMAVFSLG-LSAKIVMRFGIRKPLAAGLWLAAIGLALFARAPVNGSFVVDV 363
           GL  LP  I +  F +G L+   + R G  + L+  L L+A G  L+        ++   
Sbjct: 300 GLTILP--IPLGAFIVGPLAGLALPRIGAERILSTSLALSAAGALLYLLGYAGEQWL--Q 355

Query: 364 LPGMMLLGLGAGMAFNPMLLAAMSEVSPSDSGLASGVVNTAFMMGGALGLAVLASAAAAR 423
           +    LLG G G A      A + +     +G+A+ +   ++ +GGALG+A+L S  +A 
Sbjct: 356 ILSFSLLGFGVGAAMTAASSAMLLQAPADRAGMAASIEEVSYELGGALGIAILGSLMSAV 415

Query: 424 TASMDAAGAQMPLALTGGYNLAFLVGAVFAAAA 456
            A+       M L       L  L GA+ AA A
Sbjct: 416 YAAAIVTPGTMALP---DLALDSLDGALIAAEA 445