Pairwise Alignments

Query, 488 a.a., Uncharacterized MFS-type transporter from Variovorax sp. SCN45

Subject, 477 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

 Score =  171 bits (433), Expect = 5e-47
 Identities = 136/464 (29%), Positives = 229/464 (49%), Gaps = 19/464 (4%)

Query: 8   RKRWLALM-VLCLGVLMIVLDTTIVNVALPSIRTDLGFTETSLVWVVNAYMLTFGGFLLL 66
           RK +L +   + L + +  +D T++  A P+I  DLG  + S  W+   YML     + +
Sbjct: 7   RKTFLGIFFTVFLPMFLAAVDQTLLATATPAIVRDLGNLQLSS-WIAIGYMLASAASVPV 65

Query: 67  GGRLGDLYGHRKLFLIGLVLFTLASLACGISNSQVLLVAARAVQGLGGAVVSAVSLSLIM 126
            G LGD YG + + +I L +F L S+ C  + +   LVA R VQGLG   + ++S +LI 
Sbjct: 66  YGWLGDQYGRKPMLMIALSIFALGSVICAFAMNMPWLVAGRIVQGLGSGGLMSLSQALIG 125

Query: 127 NLFTEPAERAKAMGVYGFVCAGGGSIGVLLGGLLTSTLSWHWIFLVNLP-IGVAVYALC- 184
            L   P ERA+  G +  + A     G +LGG+L + LSW W+F  NLP +G+A+Y L  
Sbjct: 126 EL-VPPRERARFQGYFSSLFAVASIGGPVLGGVLVTYLSWQWLFWFNLPLVGIALYRLAR 184

Query: 185 VALLPSARGHAHGEKLDVAGAVTVTLSLMLAVYGV-VNGNEAGWGSTQTVGLLGAAVVLL 243
              + S+R       +DVAG +     + L +Y +   G+   W S  ++ L+ A V+  
Sbjct: 185 FQFVQSSR--KSEASIDVAGLILFPSMMTLIIYWLSAGGHYFPWFSVTSISLVSAFVLTS 242

Query: 244 AVFIAIEARVQHPLMPLGLFRLRSVSVANVVGVLWAAAMFAWFFISALYMQLVLQYTPMQ 303
            +FIA + RV    +PL L   R + +  +   ++AA +FA  F   +++QL L+    Q
Sbjct: 243 LLFIAQQKRVTASFLPLRLLARREIHIPLLSTFIFAACLFALIFFLPIFLQLGLRVNAAQ 302

Query: 304 IGLAFLP--ANIIMAVFSLGLSAKIVMRFGIRKPLAA-GLWLAAIGLALFARAPVNGSFV 360
            GL  +P    II   ++ G   K++ + G+ K L   G+ L++   A+ A   ++   V
Sbjct: 303 SGLLLIPLSCGIIGGAYTTG---KVIAKTGVPKFLPVFGMSLSSCAFAVLAMFSLSAP-V 358

Query: 361 VDVLPGMMLLGLGAGMAFNPMLLAAMSEVSPSDSGLASGVVNTAFMMGGALGLAVLASAA 420
           V  +  +  LGLG  M    +L+  ++    ++ G  + + + +  +G ++G A   +  
Sbjct: 359 VSAIAALCGLGLGTVMPSTQVLVQTLA--GKANLGRITAMASLSRSLGASVGTAFFGTLI 416

Query: 421 AARTASMDA-AGAQMPLALTGGYNL-AFLVGAVFAAAAGLIGVL 462
            +    +   +G Q   AL     L AF +G   AA   L+G L
Sbjct: 417 YSLLPGLSPNSGLQAIAALPQSEILHAFQIGFAVAALLALLGAL 460