Pairwise Alignments

Query, 252 a.a., Integral membrane protein from Variovorax sp. SCN45

Subject, 251 a.a., Predicted permeases from Phaeobacter inhibens DSM 17395

 Score =  145 bits (366), Expect = 8e-40
 Identities = 83/246 (33%), Positives = 138/246 (56%), Gaps = 11/246 (4%)

Query: 11  FYAVAIPAVLLLGISKSGFGAGFGSLAVPLMALAVTVPQAAAILMPLLLLMDVLGLAAF- 69
           F+ VA+ A+   G+SK+GFG+G    +  ++AL V    A A ++PLL+L+DV  L  + 
Sbjct: 8   FFLVAVLAITFAGVSKAGFGSGAAFASSSILALIVEPGVALAFMLPLLMLIDVASLRPYW 67

Query: 70  -RRDFDRSLLKFLIPFGLLGTVVGTLLFRMLSAHTVAGIVGVFTLLFLAQRLLFP----- 123
            R     SLL  LI  GL G  +G + ++ + A  +  ++GV ++ F+A +L        
Sbjct: 68  GRWRLRESLL--LILGGLPGVALGAVFYKSVDADAMRILIGVISVAFVAWQLSGRLRARL 125

Query: 124 PKPDDPLPSRGVGAVLTTVSGFTSFIAHAGGPPINAYVIPLRLKPVIFTATMAYFFFVVN 183
            KP +     G+  V   V+GFTSF++HAGGPP   Y++   +    + A+    F ++N
Sbjct: 126 AKPREKADVTGI--VAGVVAGFTSFVSHAGGPPAAVYLLGRNMSKTEYQASTVLVFGILN 183

Query: 184 LSKWIPYAWLGLIDFRTLATSLVLMPIAPFGVWVGIRIARRIDATWFYRFVYLGMLLTGL 243
            +K++PYA LG++   +L   L+L P A  G W+G+R+  R+    F+   Y+ ++ TG 
Sbjct: 184 AAKFVPYAMLGMVTPASLTLDLMLAPFALLGAWIGVRLHHRVSEPVFFGLTYVLLVTTGT 243

Query: 244 KLVYDG 249
           KL++DG
Sbjct: 244 KLIWDG 249